Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 ZNF137P-201ENST00000456718 1920 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX18Q96RF0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX18Q96RF0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 FRG1BP-201ENST00000278882 761 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX18Q96RF0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX18Q96RF0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX18Q96RF0 RNA5SP258-201ENST00000362750 119 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 RNU6-97P-201ENST00000363387 104 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 GLULP6-201ENST00000399502 913 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AL138878.1-201ENST00000405131 347 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 RNU2-8P-201ENST00000410727 190 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 RAB28P1-201ENST00000411517 641 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNX18Q96RF0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 MTND3P17-201ENST00000416968 344 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AL139413.1-201ENST00000421309 217 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC019097.1-201ENST00000424783 735 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 MTCO1P20-201ENST00000425366 358 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 PSMA2P3-201ENST00000429685 675 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 RPS6P12-201ENST00000432491 726 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 MTND1P12-201ENST00000455231 147 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 RPS4XP10-201ENST00000465034 731 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC023598.1-201ENST00000472521 361 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 MTCO3P44-201ENST00000510977 541 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 MIR2114-201ENST00000516645 80 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 IGKV1-32-201ENST00000519290 311 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC109635.3-201ENST00000529536 185 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AL512360.1-201ENST00000555346 234 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC067852.4-201ENST00000590314 478 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC068790.4-201ENST00000602474 263 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AL391646.1-201ENST00000603860 190 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AL391813.2-201ENST00000609113 322 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AL359314.1-201ENST00000616913 261 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 DUXAP9-208ENST00000622815 614 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC091905.2-201ENST00000623143 306 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC005609.4-201ENST00000625071 447 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 U3.53-201ENST00000628922 216 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX18Q96RF0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX18Q96RF0 AC073544.1-201ENST00000600110 1595 ntBASIC4.09□□□□□ -1.75
SNX18Q96RF0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
SNX18Q96RF0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
SNX18Q96RF0 AL391684.1-202ENST00000641293 1636 ntBASIC4.09□□□□□ -1.76
SNX18Q96RF0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
SNX18Q96RF0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
SNX18Q96RF0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.09□□□□□ -1.76
SNX18Q96RF0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SNX18Q96RF0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 AC079741.1-201ENST00000321498 212 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 RNU5E-1-201ENST00000362477 120 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 Y_RNA.70-201ENST00000362886 110 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 RNU6-181P-201ENST00000363225 107 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 RNU6-1085P-201ENST00000363576 107 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 Y_RNA.295-201ENST00000364918 102 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 RNA5SP151-201ENST00000365632 117 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SNX18Q96RF0 RNU6-114P-201ENST00000384704 105 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 Y_RNA.573-201ENST00000384763 105 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 RPL23AP32-201ENST00000395315 459 ntBASIC4.08□□□□□ -1.76
SNX18Q96RF0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.08□□□□□ -1.76
SNX18Q96RF0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms