Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.74□□□□□ -2.13
CSMD1Q96PZ7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AC234781.4-201ENST00000419384 244 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 RPL7P37-201ENST00000425095 738 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 HMGB1P31-201ENST00000437242 427 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 RNA5SP102-201ENST00000516865 106 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AC110588.1-201ENST00000559699 137 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 MIR7973-1-201ENST00000614683 76 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AL122125.1-201ENST00000616999 600 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 Z99129.2-201ENST00000619967 314 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 MIR708-201ENST00000390708 88 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AP003467.2-201ENST00000520175 319 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AC093591.3-201ENST00000634516 308 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AC244517.1-201ENST00000606030 2086 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 GSTA12P-201ENST00000402398 508 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AL353093.1-201ENST00000441292 436 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AC009237.8-201ENST00000445492 379 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AC004263.1-201ENST00000479327 332 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 AL512598.1-201ENST00000610158 273 ntBASIC1.73□□□□□ -2.13
CSMD1Q96PZ7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 API5P2-201ENST00000397055 1498 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 EI24P1-201ENST00000416584 867 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 MTATP6P11-201ENST00000428071 670 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 OR10D4P-201ENST00000525892 951 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 AC006116.7-201ENST00000590141 756 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 AL078603.1-201ENST00000603824 313 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 MIR8081-201ENST00000611533 95 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 AC091834.1-201ENST00000614543 472 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 MTCO1P7-201ENST00000419523 1542 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 XPOTP1-201ENST00000443317 2398 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 RNU2-32P-201ENST00000411193 191 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 RNA5SP337-201ENST00000517007 109 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 RPL21P5-201ENST00000554662 472 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 LRRC37A5P-203ENST00000580181 585 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 AC005730.3-201ENST00000583067 366 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 AL160394.1-201ENST00000624765 724 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 AC012119.1-201ENST00000603184 222 ntBASIC1.72□□□□□ -2.13
CSMD1Q96PZ7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.13
CSMD1Q96PZ7 AC005336.3-201ENST00000623833 2679 ntBASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 AL513321.1-201ENST00000441175 761 ntBASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 HSPE1P28-201ENST00000443139 211 ntBASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 MIR3186-201ENST00000577404 85 ntBASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 SNRPGP19-201ENST00000603826 189 ntBASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 HMGN2P28-201ENST00000606102 262 ntBASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 RN7SKP226-201ENST00000364912 300 ntBASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 NDUFB4P5-201ENST00000415445 361 ntBASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 AC034244.1-201ENST00000507687 207 ntBASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 AC131238.1-201ENST00000617135 328 ntBASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD1Q96PZ7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms