Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 snoU13.22-201ENST00000459428 104 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AC107222.1-201ENST00000510899 637 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AC006504.3-201ENST00000586818 523 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AC005498.1-201ENST00000592125 465 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AL160237.3-201ENST00000604114 1013 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AC025588.3-201ENST00000604182 274 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AL157817.1-201ENST00000614264 790 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AC079395.3-201ENST00000615161 484 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AP003400.6-201ENST00000624698 740 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AC017104.5-201ENST00000637647 639 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 BX649567.1-201ENST00000642071 1134 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 HMGB1P5-201ENST00000255320 642 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AC093422.3-201ENST00000428506 305 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 RNFT1P2-201ENST00000443064 757 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 HMGN3P1-201ENST00000453847 193 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 RPL21P41-201ENST00000459863 264 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AC128713.1-201ENST00000471495 306 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AC010468.3-201ENST00000508225 458 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 ISCA1P3-201ENST00000577104 373 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AC012254.4-201ENST00000588843 273 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 ZYXP1-201ENST00000617638 118 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AL163051.2-201ENST00000618976 735 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 AP006248.3-201ENST00000623580 594 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 HPVC1-201ENST00000629899 1198 ntBASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKNOX2Q96KN3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 RNU6-1339P-201ENST00000363574 91 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AL049693.1-201ENST00000402760 611 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AL357078.2-201ENST00000416486 427 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 SEPT2P1-201ENST00000419651 180 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 UBE2V1P13-201ENST00000436983 439 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 UBE2V1P5-201ENST00000440070 405 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 ACTR3P3-201ENST00000480448 893 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 CEACAMP10-202ENST00000495431 496 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 NDUFS5P6-201ENST00000529136 295 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 GLYCAM1-201ENST00000546596 285 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 PARP1P2-201ENST00000556806 195 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 MIR5685-201ENST00000579080 79 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 MIR4286-201ENST00000580651 93 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 MIR4658-201ENST00000584344 65 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 MIR3922-201ENST00000585192 84 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AC073569.3-201ENST00000619055 682 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AC092608.3-201ENST00000625017 386 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 AC127502.3-201ENST00000636170 1206 ntBASIC3.3□□□□□ -1.88
PKNOX2Q96KN3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 MIR6073-201ENST00000352083 89 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 RNU1-85P-201ENST00000364127 164 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 SNORA56-201ENST00000383966 129 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 MIR767-201ENST00000390228 109 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 ATF1P1-201ENST00000406040 927 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AL451074.5-201ENST00000415894 435 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 VN1R42P-201ENST00000424651 344 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 ELOCP3-201ENST00000439303 348 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 NANOGNBP1-201ENST00000448444 480 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 MTND2P30-201ENST00000456663 382 ntBASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.29□□□□□ -1.88
PKNOX2Q96KN3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms