Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC007256.1-201ENST00000392253 2765 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 RNU6-289P-201ENST00000364093 107 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 Y_RNA.548-201ENST00000384656 105 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 RNA5SP424-201ENST00000390988 115 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AL049693.1-201ENST00000402760 611 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 TPMTP3-201ENST00000411928 735 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC109780.2-201ENST00000413467 845 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 HMGB3P20-201ENST00000417997 600 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 RPS15AP6-201ENST00000420703 385 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC006989.1-201ENST00000427212 131 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 RPL23AP35-201ENST00000451906 501 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC010618.1-201ENST00000469924 477 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 RPS3AP50-201ENST00000487064 803 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AP001025.2-201ENST00000490908 477 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AL359273.1-201ENST00000510918 627 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC093331.1-201ENST00000521474 169 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 ERHP1-201ENST00000523006 310 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC022690.1-201ENST00000526681 550 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AP003497.1-201ENST00000528472 562 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC008011.1-201ENST00000545989 227 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 CR383656.6-201ENST00000550518 394 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC120057.2-201ENST00000571520 271 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 MIR4425-201ENST00000580572 84 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC105224.1-201ENST00000587055 421 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC022022.2-201ENST00000602989 360 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AC009570.1-201ENST00000609599 745 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 MIR6820-201ENST00000611508 62 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 AL450472.3-201ENST00000615578 367 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 MIR7641-1-201ENST00000627518 61 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 MIR7153-201ENST00000637758 57 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 CUL1P1-201ENST00000509510 2425 ntBASIC3.55□□□□□ -1.84
VPS33AQ96AX1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS33AQ96AX1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC005832.2-201ENST00000538921 1430 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AL121657.1-201ENST00000327215 531 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 RNU6-777P-201ENST00000364265 104 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AL022722.2-201ENST00000402519 180 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 MIR320C1-201ENST00000408566 88 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 HIGD1AP15-201ENST00000416198 280 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 XKRYP1-201ENST00000423438 492 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AL035407.1-201ENST00000429211 571 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 XKRYP2-201ENST00000432915 492 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC090774.1-201ENST00000435925 246 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 RPL26P6-201ENST00000440913 438 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 RPL17P49-201ENST00000443728 411 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AL592447.1-201ENST00000447592 540 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC007967.1-201ENST00000455422 1159 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 HMGB1P36-201ENST00000487709 576 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AL139099.1-201ENST00000497398 403 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC147055.4-201ENST00000504399 745 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 SCARNA14-201ENST00000516903 136 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 RNU6-352P-201ENST00000516908 107 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 RN7SKP60-201ENST00000516985 239 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AL845331.3-202ENST00000562856 261 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC136618.2-201ENST00000575091 400 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms