Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MIR6867-201ENST00000610636 67 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AL355810.1-201ENST00000614629 552 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AL136981.2-201ENST00000617319 734 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC018816.2-201ENST00000621460 353 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 CRYM-AS1-204ENST00000637983 556 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AL136164.4-201ENST00000625013 2135 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.29□□□□□ -1.88
RFT1Q96AA3 SRP72P2-201ENST00000344851 1979 ntBASIC3.29□□□□□ -1.88
RFT1Q96AA3 AC073073.2-201ENST00000609827 2578 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFT1Q96AA3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFT1Q96AA3 AL121657.1-201ENST00000327215 531 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 Y_RNA.234-201ENST00000364409 97 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 RNU6-359P-201ENST00000365466 108 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RFT1Q96AA3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 BEND7P1-201ENST00000422058 457 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC010099.3-201ENST00000423896 409 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 VN1R108P-201ENST00000431580 830 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 Z74696.2-201ENST00000436514 498 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 SNRPEP7-201ENST00000438350 220 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC010618.1-201ENST00000469924 477 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 RPS4XP22-201ENST00000480755 780 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 MTND4LP22-201ENST00000508209 276 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC093281.2-201ENST00000510153 597 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 RAC1P2-201ENST00000511164 579 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 CDH12P4-201ENST00000517835 295 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 CDH12P3-201ENST00000517935 295 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 CDH12P1-201ENST00000518435 295 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RFT1Q96AA3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 ZNF321P-202ENST00000550843 495 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC020914.6-201ENST00000594327 272 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC015726.1-201ENST00000602353 681 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 BBIP1P1-201ENST00000602999 279 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AL031176.1-201ENST00000604554 466 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AL591034.3-201ENST00000605511 685 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC080013.6-201ENST00000606185 215 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 VIS1.1-201ENST00000610517 203 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AL139418.1-201ENST00000613613 177 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 MIR6500-201ENST00000622700 86 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 MIR7641-1-201ENST00000627518 61 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.28□□□□□ -1.88
RFT1Q96AA3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RFT1Q96AA3 AC002546.1-201ENST00000588041 2504 ntBASIC3.28□□□□□ -1.88
RFT1Q96AA3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RFT1Q96AA3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RFT1Q96AA3 SGO1P2-201ENST00000429458 1589 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 RNU6-462P-201ENST00000362659 105 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 RNA5SP97-201ENST00000365006 84 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 DEFB109C-201ENST00000382575 264 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 DEFB109B-201ENST00000382656 264 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 RNU6-882P-201ENST00000391025 103 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC119751.3-201ENST00000399720 670 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 RNU6-55P-201ENST00000411092 107 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 RNU6-954P-201ENST00000411355 107 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AL356095.1-201ENST00000417217 199 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 RPL17P36-201ENST00000420302 549 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 MTND5P25-201ENST00000430499 799 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 RPS27AP1-201ENST00000475545 471 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC104563.1-201ENST00000476147 376 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC004263.1-201ENST00000479327 332 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC012181.1-201ENST00000479895 423 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC147055.4-201ENST00000504399 745 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 MLLT10P2-201ENST00000506434 249 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC105313.1-201ENST00000509121 353 ntBASIC3.27□□□□□ -1.89
RFT1Q96AA3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.27□□□□□ -1.89
RFT1Q96AA3 AC105914.1-201ENST00000511798 226 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms