Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TOPBP1Q92547 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.37□□□□□ -1.87
TOPBP1Q92547 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TOPBP1Q92547 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TOPBP1Q92547 AP1B1P2-201ENST00000416196 106 ntBASIC3.36□□□□□ -1.87
TOPBP1Q92547 RPL23AP76-201ENST00000441860 458 ntBASIC3.36□□□□□ -1.87
TOPBP1Q92547 MIR5002-201ENST00000584713 97 ntBASIC3.36□□□□□ -1.87
TOPBP1Q92547 AL110115.1-201ENST00000614396 364 ntBASIC3.36□□□□□ -1.87
TOPBP1Q92547 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.36□□□□□ -1.87
TOPBP1Q92547 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.36□□□□□ -1.87
TOPBP1Q92547 MTND5P27-201ENST00000428871 1720 ntBASIC3.36□□□□□ -1.87
TOPBP1Q92547 AL627390.1-201ENST00000396055 340 ntBASIC3.35□□□□□ -1.87
TOPBP1Q92547 AC012498.1-201ENST00000424037 437 ntBASIC3.35□□□□□ -1.87
TOPBP1Q92547 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.35□□□□□ -1.87
TOPBP1Q92547 AC009969.1-201ENST00000438726 172 ntBASIC3.35□□□□□ -1.87
TOPBP1Q92547 RPS29P11-201ENST00000496507 171 ntBASIC3.35□□□□□ -1.87
TOPBP1Q92547 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.35□□□□□ -1.87
TOPBP1Q92547 AC023043.3-201ENST00000593113 385 ntBASIC3.35□□□□□ -1.87
TOPBP1Q92547 AC091046.2-201ENST00000620775 665 ntBASIC3.35□□□□□ -1.87
TOPBP1Q92547 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TOPBP1Q92547 AC066616.2-201ENST00000559334 1481 ntBASIC3.35□□□□□ -1.87
TOPBP1Q92547 SNORA62.2-201ENST00000364672 152 ntBASIC3.34□□□□□ -1.87
TOPBP1Q92547 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.34□□□□□ -1.87
TOPBP1Q92547 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
TOPBP1Q92547 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
TOPBP1Q92547 AC096586.2-201ENST00000610260 441 ntBASIC3.34□□□□□ -1.87
TOPBP1Q92547 AC092650.2-201ENST00000619984 902 ntBASIC3.34□□□□□ -1.87
TOPBP1Q92547 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TOPBP1Q92547 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TOPBP1Q92547 VN1R31P-201ENST00000417498 730 ntBASIC3.34□□□□□ -1.88
TOPBP1Q92547 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.34□□□□□ -1.88
TOPBP1Q92547 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.34□□□□□ -1.88
TOPBP1Q92547 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.34□□□□□ -1.88
TOPBP1Q92547 SNORA70.14-201ENST00000516205 110 ntBASIC3.34□□□□□ -1.88
TOPBP1Q92547 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.34□□□□□ -1.88
TOPBP1Q92547 CBX3P5-201ENST00000552017 521 ntBASIC3.34□□□□□ -1.88
TOPBP1Q92547 MTND2P13-201ENST00000577438 1039 ntBASIC3.34□□□□□ -1.88
TOPBP1Q92547 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.34□□□□□ -1.88
TOPBP1Q92547 AC067852.7-201ENST00000623270 535 ntBASIC3.34□□□□□ -1.88
TOPBP1Q92547 Y_RNA.540-201ENST00000384638 111 ntBASIC3.33□□□□□ -1.88
TOPBP1Q92547 MIR518E-201ENST00000385252 88 ntBASIC3.33□□□□□ -1.88
TOPBP1Q92547 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.33□□□□□ -1.88
TOPBP1Q92547 TRIM60P18-201ENST00000441518 828 ntBASIC3.33□□□□□ -1.88
TOPBP1Q92547 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.33□□□□□ -1.88
TOPBP1Q92547 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.33□□□□□ -1.88
TOPBP1Q92547 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.33□□□□□ -1.88
TOPBP1Q92547 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.33□□□□□ -1.88
TOPBP1Q92547 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.33□□□□□ -1.88
TOPBP1Q92547 Y_RNA.116-201ENST00000363292 103 ntBASIC3.32□□□□□ -1.88
TOPBP1Q92547 USP9YP8-201ENST00000441913 500 ntBASIC3.32□□□□□ -1.88
TOPBP1Q92547 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.32□□□□□ -1.88
TOPBP1Q92547 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.32□□□□□ -1.88
TOPBP1Q92547 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.32□□□□□ -1.88
TOPBP1Q92547 NDUFA5P6-201ENST00000542110 379 ntBASIC3.32□□□□□ -1.88
TOPBP1Q92547 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
TOPBP1Q92547 PSMA6P4-201ENST00000603247 718 ntBASIC3.32□□□□□ -1.88
TOPBP1Q92547 AL356280.1-201ENST00000603614 379 ntBASIC3.32□□□□□ -1.88
TOPBP1Q92547 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TOPBP1Q92547 DEFA7P-201ENST00000382676 285 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 AC019129.1-201ENST00000403786 261 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.31□□□□□ -1.88
TOPBP1Q92547 AL445685.2-201ENST00000422551 342 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 NDUFA5P4-201ENST00000436704 385 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 SDR42E1P3-201ENST00000438345 502 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 TAF9P1-201ENST00000445421 515 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 AC243772.1-201ENST00000451620 410 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 TAF9P2-201ENST00000454958 515 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 AP000852.1-201ENST00000472460 573 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 AC111000.5-201ENST00000506559 1178 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.31□□□□□ -1.88
TOPBP1Q92547 MIR4303-201ENST00000581299 66 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.31□□□□□ -1.88
TOPBP1Q92547 AC004241.3-201ENST00000611728 517 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.31□□□□□ -1.88
TOPBP1Q92547 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.31□□□□□ -1.88
TOPBP1Q92547 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
TOPBP1Q92547 AL139276.1-201ENST00000311910 1001 ntBASIC3.3□□□□□ -1.88
TOPBP1Q92547 RNU6-1331P-201ENST00000363658 106 ntBASIC3.3□□□□□ -1.88
TOPBP1Q92547 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TOPBP1Q92547 RNU6-233P-201ENST00000410845 141 ntBASIC3.3□□□□□ -1.88
TOPBP1Q92547 SDCBPP3-201ENST00000419629 891 ntBASIC3.3□□□□□ -1.88
TOPBP1Q92547 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.3□□□□□ -1.88
TOPBP1Q92547 snoU13.18-201ENST00000459483 104 ntBASIC3.3□□□□□ -1.88
TOPBP1Q92547 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.3□□□□□ -1.88
TOPBP1Q92547 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.3□□□□□ -1.88
TOPBP1Q92547 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.3□□□□□ -1.88
TOPBP1Q92547 SNRPGP19-201ENST00000603826 189 ntBASIC3.3□□□□□ -1.88
TOPBP1Q92547 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TOPBP1Q92547 FAM35CP-201ENST00000554755 2470 ntBASIC3.3□□□□□ -1.88
TOPBP1Q92547 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TOPBP1Q92547 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.3□□□□□ -1.88
TOPBP1Q92547 AC007182.2-201ENST00000489251 402 ntBASIC3.29□□□□□ -1.88
TOPBP1Q92547 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.29□□□□□ -1.88
TOPBP1Q92547 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.29□□□□□ -1.88
TOPBP1Q92547 AC068446.3-201ENST00000555285 382 ntBASIC3.29□□□□□ -1.88
TOPBP1Q92547 AC084768.2-201ENST00000622736 221 ntBASIC3.29□□□□□ -1.88
TOPBP1Q92547 AC084035.1-201ENST00000634543 607 ntBASIC3.29□□□□□ -1.88
TOPBP1Q92547 AC004520.1-201ENST00000608362 1413 ntBASIC3.29□□□□□ -1.88
TOPBP1Q92547 AC244033.1-201ENST00000426826 870 ntBASIC3.29□□□□□ -1.88
TOPBP1Q92547 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms