Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC017037.2-201ENST00000513850 890 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC114797.1-201ENST00000514003 728 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 RN7SKP276-201ENST00000516242 268 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AP003385.6-201ENST00000531603 374 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AP006289.1-201ENST00000538089 277 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 GSTP1P1-201ENST00000548078 319 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 RN7SL652P-201ENST00000577769 300 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC103710.2-201ENST00000609912 942 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 AC130324.3-201ENST00000614165 542 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 MIR7703-201ENST00000620784 77 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PCDH19Q8TAB3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 NEAT1-202ENST00000501122 22743 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC006020.1-201ENST00000420179 1854 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 RNU4-44P-201ENST00000363050 141 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 RNU4-76P-201ENST00000364509 141 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC019155.1-201ENST00000382242 574 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 MIR558-201ENST00000384920 94 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 MIR141-201ENST00000384975 95 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 RPS4XP9-201ENST00000405151 780 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 RPS16P5-201ENST00000406501 404 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 RPS27AP12-201ENST00000429552 465 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 OR4K11P-201ENST00000431829 904 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 ELOCP18-201ENST00000434209 337 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 RPL35AP22-201ENST00000436855 335 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 CBWD4P-201ENST00000445695 655 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 H2AFZP5-201ENST00000446960 382 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 RPS17P13-201ENST00000448974 407 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC006512.1-201ENST00000468816 291 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 RN7SL459P-201ENST00000481078 302 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC233702.1-201ENST00000482905 502 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC068305.1-201ENST00000497406 726 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC108043.1-201ENST00000512696 574 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC105417.1-201ENST00000514691 285 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 SNORD27.1-201ENST00000516319 72 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 RN7SKP116-201ENST00000516902 319 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 HMGN1P28-201ENST00000521340 364 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 OR5BN1P-201ENST00000532955 829 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AL133271.1-201ENST00000538229 291 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 ARL2BPP2-201ENST00000550907 489 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AL110118.1-201ENST00000553543 400 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 OR4K8P-201ENST00000578842 1048 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 MIR6780A-201ENST00000615089 68 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 AC108467.2-201ENST00000617640 1597 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 MTCO1P9-201ENST00000505577 1534 ntBASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH19Q8TAB3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 HSPE1P11-201ENST00000339579 310 ntBASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 RNU6-845P-201ENST00000362578 103 ntBASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 RNU6-996P-201ENST00000365438 107 ntBASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 Y_RNA.356-201ENST00000365475 113 ntBASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 RNU6-39P-201ENST00000384344 107 ntBASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 Y_RNA.493-201ENST00000384422 102 ntBASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 RNU6-1011P-201ENST00000384668 107 ntBASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 SNORD96B-201ENST00000386148 79 ntBASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 SNORA68.2-201ENST00000391263 128 ntBASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 RNU6-516P-201ENST00000411381 104 ntBASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDH19Q8TAB3 AC119751.6-201ENST00000416712 186 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms