Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 SNORA31-201ENST00000362607 130 ntBASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 RNU2-6P-201ENST00000411404 190 ntBASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 RNA5SP200-201ENST00000516360 103 ntBASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 MIR4303-201ENST00000581299 66 ntBASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 KPNA2P1-201ENST00000458289 1591 ntBASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.76□□□□□ -2.13
CCDC168Q8NDH2 API5P2-201ENST00000397055 1498 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC009237.8-201ENST00000445492 379 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC011352.3-201ENST00000505162 593 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC122134.1-201ENST00000565664 1104 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 CU459211.1-201ENST00000635667 749 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC016717.2-201ENST00000609089 5141 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC011978.2-201ENST00000569835 2054 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 Y_RNA.433-201ENST00000384089 102 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC007182.2-201ENST00000489251 402 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 HMGN2P28-201ENST00000606102 262 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC120053.1-201ENST00000607706 736 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC009831.4-201ENST00000620744 325 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 AP001486.2-201ENST00000561652 5113 ntBASIC1.75□□□□□ -2.13
CCDC168Q8NDH2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 Y_RNA.390-201ENST00000383932 102 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 MIR181B1-201ENST00000385240 110 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 RPL23AP74-201ENST00000437246 471 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 RPS27P29-201ENST00000463110 252 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AC117532.1-201ENST00000514638 323 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AC091834.1-201ENST00000614543 472 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AC093591.3-201ENST00000634516 308 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 WWP1P1-201ENST00000466609 2769 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AC095050.2-201ENST00000510748 1458 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 OR4K11P-201ENST00000431829 904 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 RNU7-170P-201ENST00000459303 61 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 AC012182.1-201ENST00000570133 895 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 WISP1-OT1-201ENST00000602893 642 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 BX664608.1-201ENST00000610519 487 ntBASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
CCDC168Q8NDH2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 SNORA51.12-201ENST00000384448 134 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 AL021407.1-201ENST00000404531 386 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 AL590004.2-201ENST00000404787 371 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 AL390023.1-201ENST00000428836 262 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 AC092427.1-202ENST00000430569 476 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 HSPE1P28-201ENST00000443139 211 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 HMGB3P8-201ENST00000449709 577 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 NAMPTP2-201ENST00000505629 1115 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 MIR4644-201ENST00000579929 84 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 AL356280.1-201ENST00000603614 379 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 AL356266.1-201ENST00000623311 483 ntBASIC1.73□□□□□ -2.13
CCDC168Q8NDH2 AC103988.1-201ENST00000566382 2177 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms