Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AL356535.1-201ENST00000440335 398 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 MTND5P14-201ENST00000441481 1267 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC116337.2-201ENST00000477662 156 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC093767.1-201ENST00000504523 156 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 SNORA70.14-201ENST00000516205 110 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 Y_RNA.695-201ENST00000516715 107 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 RPL12P22-201ENST00000519073 490 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 COX6CP8-201ENST00000522620 226 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC068587.4-201ENST00000533893 186 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC023161.2-201ENST00000551218 780 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC012414.6-201ENST00000568241 401 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC073544.2-201ENST00000601155 540 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC007687.1-201ENST00000602704 304 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC107214.2-201ENST00000608204 634 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC128687.2-201ENST00000609657 566 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC019176.2-201ENST00000611579 315 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AL391261.4-201ENST00000616012 481 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC084757.4-201ENST00000616350 526 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AL357080.1-201ENST00000617394 239 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AL445264.1-201ENST00000621719 171 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AL773545.4-201ENST00000637262 310 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AL513478.4-201ENST00000641636 310 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 RNU6-623P-201ENST00000363143 105 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 U3.4-201ENST00000363352 213 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 RNA5SP322-201ENST00000363617 119 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 SNORD116-4-201ENST00000384733 96 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 OFD1P18Y-201ENST00000420889 959 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC017083.1-201ENST00000428093 483 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AL365184.2-201ENST00000431139 435 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 MUPP-201ENST00000438111 566 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 EPS15P1-201ENST00000448836 336 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 PRSS3P4-201ENST00000453323 162 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 RPL21P11-201ENST00000461458 483 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC010424.1-201ENST00000506336 297 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC109458.1-201ENST00000508858 316 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 RN7SKP234-201ENST00000517173 224 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 DUXAP2-201ENST00000519198 589 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC103987.3-201ENST00000582071 292 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 RSL24D1P11-201ENST00000591045 491 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AP000403.1-201ENST00000603349 851 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 YWHAQP7-201ENST00000603536 658 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 RN7SKP299-201ENST00000606679 301 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AL513477.2-201ENST00000607858 568 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC025594.3-201ENST00000613068 790 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AL139089.1-201ENST00000620372 975 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 MIR4496-201ENST00000635896 61 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AC138649.5-201ENST00000637456 137 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS52Q8N1B4 FAM35DP-201ENST00000323387 2712 ntBASIC4.19□□□□□ -1.74
VPS52Q8N1B4 AL022578.1-201ENST00000439330 1433 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms