Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AL603755.1-201ENST00000619504 163 ntBASIC3.33□□□□□ -1.88
CHMP1BQ7LBR1 AL356596.1-201ENST00000624230 379 ntBASIC3.33□□□□□ -1.88
CHMP1BQ7LBR1 AC009039.2-201ENST00000624524 529 ntBASIC3.33□□□□□ -1.88
CHMP1BQ7LBR1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.33□□□□□ -1.88
CHMP1BQ7LBR1 ZNF734P-201ENST00000419494 1534 ntBASIC3.33□□□□□ -1.88
CHMP1BQ7LBR1 AL079343.1-201ENST00000572358 1771 ntBASIC3.33□□□□□ -1.88
CHMP1BQ7LBR1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHMP1BQ7LBR1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHMP1BQ7LBR1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 RPL21P132-201ENST00000331267 462 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 RNU6-500P-201ENST00000362349 107 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 RNU4-40P-201ENST00000364351 143 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 U3.15-201ENST00000365398 212 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 SNORD3H-201ENST00000384486 214 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 MIR7-3-201ENST00000384898 110 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AL355379.1-201ENST00000405542 640 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 RNA5SP56-201ENST00000410277 118 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 RPS29P4-201ENST00000414733 161 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 MTCYBP24-201ENST00000420387 1106 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC069157.1-201ENST00000421749 137 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 GLRXP1-201ENST00000423261 334 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 USP9YP10-201ENST00000454868 628 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 BX322784.1-201ENST00000455793 1077 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 HMGN2P7-201ENST00000456186 273 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 SNORD105B-201ENST00000458770 79 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 MEMO1P3-201ENST00000459811 302 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC005178.1-201ENST00000508392 440 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 PTGES3P3-201ENST00000511479 482 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC010486.3-201ENST00000511602 785 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 ARL2BPP6-201ENST00000512757 439 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC093677.1-201ENST00000514414 678 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 RN7SKP209-201ENST00000516888 304 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 MIR3915-201ENST00000578518 97 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 MIR4425-201ENST00000580572 84 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 VN1R92P-201ENST00000598511 928 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 WISP1-OT1-201ENST00000602893 642 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 LLPHP1-201ENST00000603571 367 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 C2orf27A-204ENST00000623058 969 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 PCMTD1P7-201ENST00000634506 357 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 AP000553.6-201ENST00000641242 118 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 NUP58P1-201ENST00000502546 1738 ntBASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.32□□□□□ -1.88
CHMP1BQ7LBR1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 GDI2P1-201ENST00000429312 1336 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 RNU6-289P-201ENST00000364093 107 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 Y_RNA.302-201ENST00000364997 102 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 SNORD116-2-201ENST00000384274 95 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 Y_RNA.560-201ENST00000384689 102 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 U8.11-201ENST00000384699 133 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 U8.12-201ENST00000384701 133 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 SNORD116-6-201ENST00000384711 96 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 MIR449B-201ENST00000384995 97 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 MIR218-2-201ENST00000385006 110 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 AL391417.1-201ENST00000404100 426 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 RNU4-78P-201ENST00000410940 126 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 HMGB3P20-201ENST00000417997 600 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 RPL31P45-201ENST00000419532 356 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 RPL31P12-201ENST00000422587 358 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 AL049610.1-201ENST00000423374 372 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 AL445669.1-201ENST00000426743 755 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 HSPD1P21-201ENST00000436541 245 ntBASIC3.31□□□□□ -1.88
CHMP1BQ7LBR1 UBE2D3P4-201ENST00000441973 436 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms