Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.74□□□□□ -1.81
USP43Q70EL4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AL022154.1-201ENST00000604698 785 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AC090525.3-201ENST00000605601 189 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AC103710.3-201ENST00000608157 948 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AC024560.3-201ENST00000608482 349 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC002553.4-201ENST00000616896 331 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AC007546.1-201ENST00000619452 559 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AC002550.2-201ENST00000621246 394 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AC034229.5-201ENST00000624258 185 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 MTND5P42-201ENST00000637720 498 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.74□□□□□ -1.81
USP43Q70EL4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP43Q70EL4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.73□□□□□ -1.81
USP43Q70EL4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP43Q70EL4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
USP43Q70EL4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
USP43Q70EL4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
USP43Q70EL4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
USP43Q70EL4 RNA5SP515-201ENST00000364570 118 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 Y_RNA.302-201ENST00000364997 102 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 RNU6-619P-201ENST00000365146 108 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 RNU4-12P-201ENST00000365233 139 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 Y_RNA.450-201ENST00000384198 113 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 MIR3065-201ENST00000390137 79 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 RPS26P8-201ENST00000393490 348 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AL445189.1-201ENST00000405722 338 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 RPS20P15-201ENST00000412792 311 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.73□□□□□ -1.81
USP43Q70EL4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.73□□□□□ -1.81
USP43Q70EL4 Z93242.1-201ENST00000427102 353 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 RPS29P17-201ENST00000430795 166 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.73□□□□□ -1.81
USP43Q70EL4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.73□□□□□ -1.81
USP43Q70EL4 ACTR3P2-201ENST00000439585 1257 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.73□□□□□ -1.81
USP43Q70EL4 COX6CP12-201ENST00000446748 202 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.73□□□□□ -1.81
USP43Q70EL4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.73□□□□□ -1.81
USP43Q70EL4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.73□□□□□ -1.81
USP43Q70EL4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.73□□□□□ -1.81
USP43Q70EL4 RNU7-27P-201ENST00000459281 62 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 RN7SL330P-201ENST00000469709 307 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AC013828.1-201ENST00000481845 158 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 OR5AK1P-201ENST00000524837 922 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
USP43Q70EL4 DEFB108A-201ENST00000530110 222 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.73□□□□□ -1.81
USP43Q70EL4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.73□□□□□ -1.81
USP43Q70EL4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.73□□□□□ -1.81
USP43Q70EL4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.73□□□□□ -1.81
USP43Q70EL4 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AC022884.3-201ENST00000579571 248 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 MIR4637-201ENST00000582405 84 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AC006504.3-201ENST00000586818 523 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.73□□□□□ -1.81
USP43Q70EL4 UBE2V2P2-201ENST00000587677 504 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 VN1R84P-201ENST00000593697 235 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.73□□□□□ -1.81
USP43Q70EL4 VN1R85P-201ENST00000601587 426 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AL390838.2-201ENST00000602394 274 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.73□□□□□ -1.81
USP43Q70EL4 AC091304.9-201ENST00000612091 226 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AL021997.2-201ENST00000615674 271 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.73□□□□□ -1.81
USP43Q70EL4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.73□□□□□ -1.81
USP43Q70EL4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP43Q70EL4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
USP43Q70EL4 CR381653.2-201ENST00000624041 768 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP43Q70EL4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.73□□□□□ -1.81
USP43Q70EL4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP43Q70EL4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP43Q70EL4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.73□□□□□ -1.81
USP43Q70EL4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP43Q70EL4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP43Q70EL4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
USP43Q70EL4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.73□□□□□ -1.81
USP43Q70EL4 Z82217.1-201ENST00000625157 8149 ntBASIC3.73□□□□□ -1.81
USP43Q70EL4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USP43Q70EL4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP43Q70EL4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
USP43Q70EL4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
USP43Q70EL4 RNU6-660P-201ENST00000364566 109 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 Y_RNA.263-201ENST00000364659 114 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 Y_RNA.326-201ENST00000365176 113 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP43Q70EL4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
USP43Q70EL4 U1.1-201ENST00000384101 164 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 RNU6-1042P-201ENST00000384204 107 ntBASIC3.72□□□□□ -1.81
USP43Q70EL4 SNORA48.7-201ENST00000391302 135 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms