Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SNORA31.22-201ENST00000517204 135 ntBASIC3.4□□□□□ -1.87
C11orf88Q6PI97 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 MIR4286-201ENST00000580651 93 ntBASIC3.4□□□□□ -1.87
C11orf88Q6PI97 AC006116.5-201ENST00000591936 559 ntBASIC3.4□□□□□ -1.87
C11orf88Q6PI97 AL591034.3-201ENST00000605511 685 ntBASIC3.4□□□□□ -1.87
C11orf88Q6PI97 RNU4-89P-201ENST00000607443 133 ntBASIC3.4□□□□□ -1.87
C11orf88Q6PI97 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 AC006386.1-201ENST00000619436 415 ntBASIC3.4□□□□□ -1.87
C11orf88Q6PI97 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 AL159972.1-201ENST00000625150 448 ntBASIC3.4□□□□□ -1.87
C11orf88Q6PI97 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
C11orf88Q6PI97 AP000776.1-201ENST00000530032 1663 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RNU6-777P-201ENST00000364265 104 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RNA5SP479-201ENST00000364858 117 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 MIR325-201ENST00000385260 98 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 HLFP1-201ENST00000402375 499 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 SNORA11-201ENST00000408789 128 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RNA5SP317-201ENST00000410176 116 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RNA5SP36-201ENST00000410197 133 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RN7SKP27-201ENST00000410684 333 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RN7SKP182-201ENST00000410772 298 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RNA5SP311-201ENST00000411290 116 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC008850.1-201ENST00000427546 362 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AL590383.1-201ENST00000428602 75 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AL356867.1-201ENST00000429623 299 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC112653.1-201ENST00000443851 386 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC021382.1-201ENST00000483523 359 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RPS3AP50-201ENST00000487064 803 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AP001025.2-201ENST00000490908 477 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC091951.3-201ENST00000504093 246 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 TPT1P8-201ENST00000510120 555 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RNA5SP315-201ENST00000516340 116 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RNA5SP519-201ENST00000516480 119 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 RNA5SP312-201ENST00000517068 116 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 NBEAP1-201ENST00000554452 979 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AL133507.1-201ENST00000605269 557 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 BRDTP1-201ENST00000605735 677 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC004832.5-201ENST00000608677 401 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 MIR6130-201ENST00000619419 109 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AL445363.3-201ENST00000623080 671 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC091905.1-201ENST00000624400 311 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC010608.2-201ENST00000624830 470 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC008013.2-202ENST00000637965 364 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 FAM35BP-202ENST00000497389 3337 ntBASIC3.39□□□□□ -1.87
C11orf88Q6PI97 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
C11orf88Q6PI97 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 TPTE2P4-201ENST00000258589 1605 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 SPRR2C-201ENST00000290702 219 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 RNU6-637P-201ENST00000384050 107 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 RNU1-13P-201ENST00000384499 162 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 SOD2P1-201ENST00000396543 562 ntBASIC3.38□□□□□ -1.87
C11orf88Q6PI97 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.38□□□□□ -1.87
C11orf88Q6PI97 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms