Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC124016.2-201ENST00000610058 665 ntBASIC3.28□□□□□ -1.88
ATL3Q6DD88 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ATL3Q6DD88 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATL3Q6DD88 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATL3Q6DD88 SNORA48.5-201ENST00000391143 135 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 MTND4LP20-201ENST00000402379 270 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 MTCYBP15-201ENST00000433123 1127 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC104073.1-201ENST00000451988 151 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC083906.5-201ENST00000503722 328 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC109471.1-201ENST00000511631 612 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 SNORA31.20-201ENST00000517111 133 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 AP000619.3-201ENST00000535634 1127 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 MTCO3P24-201ENST00000572729 782 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 MTCO3P13-201ENST00000577757 781 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC068620.3-201ENST00000602749 560 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 AP002802.2-201ENST00000605877 235 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 VN1R74P-201ENST00000613259 503 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC090116.1-201ENST00000615679 446 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC073968.1-201ENST00000618594 637 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.27□□□□□ -1.89
ATL3Q6DD88 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.27□□□□□ -1.89
ATL3Q6DD88 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC092593.1-201ENST00000515413 1815 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 ASNSP3-201ENST00000451989 1306 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 RNU6-251P-201ENST00000363235 104 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 RNU6-236P-201ENST00000363886 106 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 DEFB109C-201ENST00000382575 264 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 DEFB109B-201ENST00000382656 264 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 RNU6-730P-201ENST00000383954 104 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 MIR217-201ENST00000384817 110 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 RNU6-821P-201ENST00000390995 107 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATL3Q6DD88 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 RPL23AP16-201ENST00000441715 421 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 RPL17P49-201ENST00000443728 411 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 SNORA84-201ENST00000459229 133 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 RPS26P21-201ENST00000475397 348 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 RN7SL297P-201ENST00000483161 293 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AL358832.1-201ENST00000497800 389 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC048346.1-201ENST00000510247 144 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 GMPSP1-201ENST00000514075 579 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 SNORD59.2-201ENST00000516873 68 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 RNA5SP135-201ENST00000517019 125 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 RNU6-711P-201ENST00000517255 106 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 ZNF705CP-201ENST00000530515 889 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AP002404.1-201ENST00000532005 451 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 AL121603.1-201ENST00000553815 142 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 H3F3AP1-201ENST00000559984 334 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 MIR4444-1-201ENST00000581696 74 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 MIR4444-2-201ENST00000584390 74 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 SNORD39.3-201ENST00000584451 71 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC023043.3-201ENST00000593113 385 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC006539.2-201ENST00000601729 572 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC025588.3-201ENST00000604182 274 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC128687.1-201ENST00000605304 619 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC099785.1-201ENST00000605697 437 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC080188.3-201ENST00000624842 748 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 MTND2P41-201ENST00000637599 773 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC130650.2-201ENST00000618736 2403 ntBASIC3.26□□□□□ -1.89
ATL3Q6DD88 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATL3Q6DD88 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.26□□□□□ -1.89
ATL3Q6DD88 AC111188.2-201ENST00000529697 1387 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ATL3Q6DD88 RNA5SP258-201ENST00000362750 119 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 RNU6-115P-201ENST00000364310 107 ntBASIC3.25□□□□□ -1.89
ATL3Q6DD88 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ATL3Q6DD88 AL023807.1-201ENST00000407932 359 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms