Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 Y_RNA.89-201ENST00000363031 102 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
KRT40Q6A162 RNU6-1103P-201ENST00000384150 107 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT40Q6A162 AL589872.1-201ENST00000426602 288 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 ISCA1P6-201ENST00000427740 390 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 TIMM9P3-201ENST00000428659 274 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT40Q6A162 ARPC3P5-201ENST00000448802 534 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 HMGN3P1-201ENST00000453847 193 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 MTCO3P2-201ENST00000457365 171 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT40Q6A162 AC023598.1-201ENST00000472521 361 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 RBM43P1-201ENST00000476891 1081 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AC091951.2-201ENST00000500762 203 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 MTCYBP18-201ENST00000501056 747 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AC008628.2-201ENST00000502605 298 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT40Q6A162 AC105914.1-201ENST00000511798 226 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 RNA5SP360-201ENST00000516555 118 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 RNU6-358P-201ENST00000516564 75 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 SCARNA13-201ENST00000516672 275 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 RNU6-1003P-201ENST00000517099 105 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT40Q6A162 COX6CP8-201ENST00000522620 226 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AP003181.2-201ENST00000528941 181 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AC107918.3-201ENST00000533272 382 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 RAB11AP2-201ENST00000545905 639 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.85□□□□□ -1.63
KRT40Q6A162 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
KRT40Q6A162 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT40Q6A162 AL161729.3-201ENST00000603533 673 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AL391646.1-201ENST00000603860 190 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AL365503.1-201ENST00000605247 905 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AL158211.4-201ENST00000606988 584 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AL355816.1-201ENST00000607951 118 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.85□□□□□ -1.63
KRT40Q6A162 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.85□□□□□ -1.63
KRT40Q6A162 MIR6875-201ENST00000617506 72 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.85□□□□□ -1.63
KRT40Q6A162 AC004009.2-201ENST00000623016 728 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 MTND4P29-201ENST00000503122 1372 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 CCT4P2-201ENST00000233836 1548 ntBASIC4.85□□□□□ -1.63
KRT40Q6A162 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRT40Q6A162 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KRT40Q6A162 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
KRT40Q6A162 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRT40Q6A162 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT40Q6A162 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT40Q6A162 AC011266.1-201ENST00000624119 3569 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRT40Q6A162 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
KRT40Q6A162 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRT40Q6A162 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
KRT40Q6A162 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRT40Q6A162 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRT40Q6A162 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRT40Q6A162 OR5J1P-201ENST00000313544 939 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
KRT40Q6A162 RNU6-441P-201ENST00000384545 106 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 RNU6-876P-201ENST00000391295 104 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRT40Q6A162 EIF5P1-201ENST00000400019 1231 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 SPA17P1-201ENST00000416656 452 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 HMGB3P20-201ENST00000417997 600 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 RPL36P19-201ENST00000430744 301 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT40Q6A162 SKP1P1-201ENST00000438081 489 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AC098614.3-201ENST00000438957 440 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 RPS29P7-201ENST00000439662 171 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 MTND4LP16-201ENST00000440828 295 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AP000542.1-201ENST00000448473 371 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 C1DP4-201ENST00000455429 424 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT40Q6A162 RN7SL585P-201ENST00000470538 280 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AC010301.1-201ENST00000473936 355 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AL132838.2-201ENST00000492041 314 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT40Q6A162 AC006390.1-201ENST00000508068 283 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.84□□□□□ -1.63
KRT40Q6A162 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT40Q6A162 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT40Q6A162 AC063950.1-201ENST00000552036 308 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AL157687.1-201ENST00000554853 619 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT40Q6A162 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT40Q6A162 AC107954.1-201ENST00000565906 727 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT40Q6A162 AC090312.1-201ENST00000580637 348 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT40Q6A162 AL117336.2-201ENST00000602435 335 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRT40Q6A162 AL049634.3-201ENST00000604968 457 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRT40Q6A162 AC063943.3-201ENST00000615562 356 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT40Q6A162 AC009268.2-201ENST00000621925 457 ntBASIC4.84□□□□□ -1.63
KRT40Q6A162 AL732618.1-201ENST00000623251 301 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms