Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RNU6-496P-201ENST00000516145 99 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RNA5SP170-201ENST00000517150 101 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AC069113.1-201ENST00000517763 267 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AL133271.1-201ENST00000538229 291 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 SNORD95-201ENST00000579879 68 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RPL7P50-201ENST00000600588 727 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AL158827.2-201ENST00000602494 330 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AL359881.1-201ENST00000602916 267 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AC109309.2-201ENST00000612597 332 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 RNA5SP440-201ENST00000612665 119 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AL512624.1-201ENST00000613638 469 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 TCL6_3.1-201ENST00000619064 137 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AL691447.3-201ENST00000635020 330 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AC092692.1-201ENST00000623625 2595 ntBASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RNFT1Q5M7Z0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 Y_RNA.143-201ENST00000363520 106 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 RN7SKP128-201ENST00000364270 303 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 RNU6-1325P-201ENST00000364905 105 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 SNORD116-18-201ENST00000383961 92 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 PPIAP3-201ENST00000450588 505 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AC112187.1-201ENST00000455837 479 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 PLGLA-201ENST00000465668 449 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 UBA52P7-201ENST00000486088 380 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AC093767.1-201ENST00000504523 156 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AP005639.1-201ENST00000526939 192 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AL442163.3-201ENST00000554110 156 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 FAM60BP-201ENST00000578364 658 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 FP236240.3-201ENST00000623061 327 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AC116667.1-201ENST00000604855 2072 ntBASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.42□□□□□ -1.54
RNFT1Q5M7Z0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 ZNF299P-201ENST00000406845 1804 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AL109809.4-201ENST00000603520 2185 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 MIR323A-201ENST00000362199 86 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 U3.13-201ENST00000364804 214 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 SMIM11P1-201ENST00000369586 178 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 Y_RNA.400-201ENST00000383963 111 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 Y_RNA.602-201ENST00000410535 92 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AC096921.1-201ENST00000411661 375 ntBASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.41□□□□□ -1.54
RNFT1Q5M7Z0 AC008264.1-201ENST00000447612 367 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms