Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AL354950.2-201ENST00000617939 290 ntBASIC4.81□□□□□ -1.64
FNDC3BQ53EP0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.81□□□□□ -1.64
FNDC3BQ53EP0 DUXAP9-208ENST00000622815 614 ntBASIC4.81□□□□□ -1.64
FNDC3BQ53EP0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FNDC3BQ53EP0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
FNDC3BQ53EP0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
FNDC3BQ53EP0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 MIR558-201ENST00000384920 94 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 RNU2-43P-201ENST00000410306 190 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 RNU2-39P-201ENST00000410604 198 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 RAB28P1-201ENST00000411517 641 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC007738.1-201ENST00000413892 348 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 SSXP9-201ENST00000417503 292 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC140479.3-201ENST00000418944 1126 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC099677.1-201ENST00000420575 175 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 OR2AS1P-201ENST00000427827 319 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 ATP5JP1-201ENST00000431631 322 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 RPL35AP21-201ENST00000437667 333 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 DDX3P2-201ENST00000446138 111 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC012512.1-201ENST00000446594 718 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 SNORD97-201ENST00000459187 142 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 SNORD108-201ENST00000459332 71 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC078785.3-201ENST00000476607 425 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 HSPD1P15-201ENST00000505573 1122 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 ARL2BPP2-201ENST00000550907 489 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 MIR4284-201ENST00000578924 81 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC090616.5-202ENST00000582111 297 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC005730.3-201ENST00000583067 366 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 MIR5096-201ENST00000583713 70 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 TUG1_2.1-201ENST00000614234 87 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC063943.3-201ENST00000615562 356 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AL450472.3-201ENST00000615578 367 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AL356489.2-201ENST00000566968 3528 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 AC092376.2-201ENST00000622621 4116 ntBASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
FNDC3BQ53EP0 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AC074029.4-201ENST00000624796 1859 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AC073343.1-201ENST00000328239 651 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 SNORD113.2-201ENST00000364166 89 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 Y_RNA.367-201ENST00000365544 101 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 MT-TL1-201ENST00000386347 75 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 RNU2-36P-201ENST00000410361 191 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AC138393.2-201ENST00000414742 246 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AC016691.1-201ENST00000441321 413 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 CALM1P1-201ENST00000442082 433 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 TDGF1P1-201ENST00000445734 527 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 MTND5P20-201ENST00000448677 143 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AL162389.1-201ENST00000449233 177 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AC008481.1-201ENST00000463278 396 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 RNA5SP401-201ENST00000515920 127 ntBASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.79□□□□□ -1.64
FNDC3BQ53EP0 AC005868.1-201ENST00000536421 331 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms