Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU6-276P-201ENST00000516114 96 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 RN7SKP157-201ENST00000516174 282 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC091163.3-201ENST00000518269 1144 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.84□□□□□ -1.95
RFX4Q33E94 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RFX4Q33E94 SULT1C2P1-202ENST00000562418 459 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC010653.1-201ENST00000571108 881 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.84□□□□□ -1.95
RFX4Q33E94 SNORD84-203ENST00000584275 78 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.84□□□□□ -1.95
RFX4Q33E94 AL669831.4-202ENST00000590817 238 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 BNIP3P27-201ENST00000599991 412 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 BDH2P1-201ENST00000602288 736 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.84□□□□□ -1.95
RFX4Q33E94 AC069431.2-201ENST00000604149 1099 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC112220.2-201ENST00000605513 533 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AL627309.6-201ENST00000606857 840 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AL513477.2-201ENST00000607858 568 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.84□□□□□ -1.95
RFX4Q33E94 AC107871.2-201ENST00000612894 502 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC068831.7-201ENST00000616954 363 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AL158163.2-201ENST00000619110 700 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC026634.1-201ENST00000634369 198 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
RFX4Q33E94 MTND4P9-201ENST00000507819 1346 ntBASIC2.84□□□□□ -1.96
RFX4Q33E94 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RFX4Q33E94 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
RFX4Q33E94 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
RFX4Q33E94 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RFX4Q33E94 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX4Q33E94 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX4Q33E94 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX4Q33E94 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX4Q33E94 RNU5E-10P-201ENST00000363506 118 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 SUGT1P1-201ENST00000379514 476 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 MIR490-201ENST00000384865 128 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX4Q33E94 AL023807.1-201ENST00000407932 359 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 RNU4-65P-201ENST00000410473 140 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 RNU4-78P-201ENST00000410940 126 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AC063979.1-201ENST00000415539 377 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 YPEL5P1-201ENST00000419731 367 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RFX4Q33E94 MTCO1P3-201ENST00000429327 192 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX4Q33E94 AC127537.2-201ENST00000439258 465 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.83□□□□□ -1.96
RFX4Q33E94 RPL23AP16-201ENST00000441715 421 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 Z95327.1-201ENST00000446082 482 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 TRBV26-201ENST00000456572 344 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 RPL21P10-201ENST00000463521 490 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 RN7SL20P-201ENST00000488827 297 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX4Q33E94 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX4Q33E94 AC096571.1-202ENST00000506634 735 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX4Q33E94 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.83□□□□□ -1.96
RFX4Q33E94 GMPSP1-201ENST00000514075 579 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 RNA5SP76-201ENST00000516277 87 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 SNORA31.20-201ENST00000517111 133 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX4Q33E94 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.83□□□□□ -1.96
RFX4Q33E94 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.83□□□□□ -1.96
RFX4Q33E94 LSM6P2-201ENST00000552208 177 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.83□□□□□ -1.96
RFX4Q33E94 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.83□□□□□ -1.96
RFX4Q33E94 AC096947.1-201ENST00000603233 470 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AC124312.4-201ENST00000605533 310 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AC091946.2-201ENST00000606105 291 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AC092954.1-201ENST00000609121 445 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.83□□□□□ -1.96
RFX4Q33E94 DBF4P1-201ENST00000412976 1892 ntBASIC2.83□□□□□ -1.96
RFX4Q33E94 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RFX4Q33E94 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX4Q33E94 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX4Q33E94 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.82□□□□□ -1.96
RFX4Q33E94 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.82□□□□□ -1.96
RFX4Q33E94 AP005901.5-201ENST00000545779 1796 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RFX4Q33E94 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RFX4Q33E94 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
RFX4Q33E94 AC092435.3-201ENST00000565538 3654 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 RNU6-492P-201ENST00000363035 104 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 RNU1-33P-201ENST00000364249 162 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RFX4Q33E94 RNU6-224P-201ENST00000384055 107 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 RNU6-761P-201ENST00000384148 107 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 MIR620-201ENST00000385232 95 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 RNU6-1300P-201ENST00000391046 108 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 MTND4LP20-201ENST00000402379 270 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 RPL7P25-201ENST00000404151 721 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 RNU6-1077P-201ENST00000410506 102 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.82□□□□□ -1.96
RFX4Q33E94 RPS7P15-201ENST00000415804 584 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.82□□□□□ -1.96
RFX4Q33E94 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RFX4Q33E94 MTCO3P1-205ENST00000422088 832 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 RPS6P14-201ENST00000425165 719 ntBASIC2.82□□□□□ -1.96
RFX4Q33E94 AC233728.2-201ENST00000425348 757 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms