Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RN7SL20P-201ENST00000488827 297 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 GTF2IP9-201ENST00000502460 301 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.56□□□□□ -1.84
GABPAQ06546 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.56□□□□□ -1.84
GABPAQ06546 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.56□□□□□ -1.84
GABPAQ06546 SULT1C2P1-202ENST00000562418 459 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 AC107954.1-201ENST00000565906 727 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.56□□□□□ -1.84
GABPAQ06546 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.56□□□□□ -1.84
GABPAQ06546 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.56□□□□□ -1.84
GABPAQ06546 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.56□□□□□ -1.84
GABPAQ06546 AC103710.3-201ENST00000608157 948 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 AC090116.1-201ENST00000615679 446 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 AL121895.2-201ENST00000619558 447 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 AL137790.1-201ENST00000634283 177 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GABPAQ06546 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GABPAQ06546 AC000403.1-201ENST00000613696 3585 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.56□□□□□ -1.84
GABPAQ06546 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.55□□□□□ -1.84
GABPAQ06546 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GABPAQ06546 RNU6-263P-201ENST00000363811 107 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 MIR1289-1-201ENST00000408836 144 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AL161449.1-201ENST00000414531 1199 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
GABPAQ06546 NANOGP2-201ENST00000435391 727 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.55□□□□□ -1.84
GABPAQ06546 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.55□□□□□ -1.84
GABPAQ06546 AL589880.1-201ENST00000448271 287 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AL009048.1-201ENST00000450437 298 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.55□□□□□ -1.84
GABPAQ06546 CEACAMP4-201ENST00000457676 421 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 RPL23AP62-201ENST00000463396 453 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AC108734.3-201ENST00000481241 1165 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 RPL23AP44-201ENST00000482216 473 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 OR4G11P-201ENST00000492842 939 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AP001086.1-201ENST00000494882 321 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.55□□□□□ -1.84
GABPAQ06546 RNU6-1261P-201ENST00000517194 104 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.55□□□□□ -1.84
GABPAQ06546 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GABPAQ06546 AC245884.10-201ENST00000597355 337 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 IGHV3-29-201ENST00000604817 344 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AC069545.1-201ENST00000605671 358 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AC091946.2-201ENST00000606105 291 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 RNU4-5P-201ENST00000607255 135 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AC012531.5-201ENST00000611375 151 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AC024257.5-201ENST00000612739 531 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AC005332.6-201ENST00000613178 446 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 AC090772.4-201ENST00000623599 362 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.55□□□□□ -1.84
GABPAQ06546 OR4G3P-201ENST00000633500 913 ntBASIC3.55□□□□□ -1.84
GABPAQ06546 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.55□□□□□ -1.84
GABPAQ06546 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.55□□□□□ -1.84
GABPAQ06546 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GABPAQ06546 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
GABPAQ06546 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
GABPAQ06546 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.54□□□□□ -1.84
GABPAQ06546 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
GABPAQ06546 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
GABPAQ06546 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.54□□□□□ -1.84
GABPAQ06546 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.54□□□□□ -1.84
GABPAQ06546 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
GABPAQ06546 RNU6-328P-201ENST00000390887 106 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 AL136310.1-201ENST00000404926 654 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 RNU6-584P-201ENST00000410350 95 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 RNU4-22P-201ENST00000411058 166 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 EEF1A1P41-201ENST00000414667 207 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 RPS3AP37-201ENST00000419176 745 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.54□□□□□ -1.84
GABPAQ06546 NANOGP5-201ENST00000424456 877 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 EEF1A1P39-201ENST00000440791 250 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.54□□□□□ -1.84
GABPAQ06546 HMGN2P21-201ENST00000447764 270 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 RPL37P4-201ENST00000448908 268 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 PTGES3P5-201ENST00000455109 434 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 RPS4XP13-201ENST00000483219 789 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GABPAQ06546 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 RNU6-1231P-201ENST00000517185 103 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.54□□□□□ -1.84
GABPAQ06546 AC027309.2-201ENST00000520566 192 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.54□□□□□ -1.84
GABPAQ06546 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.54□□□□□ -1.84
GABPAQ06546 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.54□□□□□ -1.84
GABPAQ06546 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.54□□□□□ -1.84
GABPAQ06546 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.54□□□□□ -1.84
GABPAQ06546 AL390838.2-201ENST00000602394 274 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 RPP40P2-201ENST00000603596 712 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 AL035411.2-201ENST00000604022 421 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 AL591516.1-201ENST00000611326 274 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 AC007318.2-201ENST00000620999 243 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.54□□□□□ -1.84
GABPAQ06546 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.54□□□□□ -1.84
GABPAQ06546 MKKS-204ENST00000639674 192 ntBASIC3.54□□□□□ -1.84
GABPAQ06546 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
GABPAQ06546 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.54□□□□□ -1.84
GABPAQ06546 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
GABPAQ06546 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms