Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL162388.1-201ENST00000450912 352 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AL445669.2-201ENST00000454425 421 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AC055876.1-202ENST00000567053 138 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
HSPG2P98160 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
HSPG2P98160 MTND4P35-201ENST00000604257 1375 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HSPG2P98160 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HSPG2P98160 MTATP6P11-201ENST00000428071 670 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AL353597.2-202ENST00000434901 373 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.29□□□□□ -2.2
HSPG2P98160 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.29□□□□□ -2.2
HSPG2P98160 MTAPP1-201ENST00000489154 819 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AC090543.1-201ENST00000492168 485 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.29□□□□□ -2.2
HSPG2P98160 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AGGF1P8-201ENST00000562979 1000 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AL137072.1-201ENST00000603444 466 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
HSPG2P98160 AC066616.2-201ENST00000559334 1481 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AC107021.2-201ENST00000567714 2095 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
HSPG2P98160 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
HSPG2P98160 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.29□□□□□ -2.2
HSPG2P98160 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
HSPG2P98160 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.29□□□□□ -2.2
HSPG2P98160 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.29□□□□□ -2.2
HSPG2P98160 AL731537.2-201ENST00000561565 951 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 APOOP1-201ENST00000604695 592 ntBASIC1.29□□□□□ -2.2
HSPG2P98160 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.29□□□□□ -2.2
HSPG2P98160 SNORD114-22-201ENST00000365423 72 ntBASIC1.28□□□□□ -2.2
HSPG2P98160 AL354719.1-201ENST00000406535 843 ntBASIC1.28□□□□□ -2.2
HSPG2P98160 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
HSPG2P98160 AC092798.1-201ENST00000458542 409 ntBASIC1.28□□□□□ -2.2
HSPG2P98160 HMGB1P41-201ENST00000520234 440 ntBASIC1.28□□□□□ -2.2
HSPG2P98160 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.28□□□□□ -2.2
HSPG2P98160 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.28□□□□□ -2.2
HSPG2P98160 MIR4285-201ENST00000581001 85 ntBASIC1.28□□□□□ -2.2
HSPG2P98160 AC108479.2-201ENST00000617314 601 ntBASIC1.28□□□□□ -2.2
HSPG2P98160 AC002076.2-201ENST00000617362 122 ntBASIC1.28□□□□□ -2.2
HSPG2P98160 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.28□□□□□ -2.2
HSPG2P98160 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HSPG2P98160 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HSPG2P98160 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HSPG2P98160 API5P2-201ENST00000397055 1498 ntBASIC1.28□□□□□ -2.2
HSPG2P98160 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HSPG2P98160 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
HSPG2P98160 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.28□□□□□ -2.2
HSPG2P98160 RPS24P8-201ENST00000431490 402 ntBASIC1.28□□□□□ -2.2
HSPG2P98160 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.28□□□□□ -2.2
HSPG2P98160 RNU7-95P-201ENST00000459222 64 ntBASIC1.28□□□□□ -2.2
HSPG2P98160 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.28□□□□□ -2.2
HSPG2P98160 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.28□□□□□ -2.2
HSPG2P98160 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.28□□□□□ -2.2
HSPG2P98160 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.28□□□□□ -2.2
HSPG2P98160 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HSPG2P98160 RNU6-342P-201ENST00000384521 104 ntBASIC1.28□□□□□ -2.21
HSPG2P98160 AC013404.1-201ENST00000413068 249 ntBASIC1.28□□□□□ -2.21
HSPG2P98160 AC005005.2-201ENST00000420779 380 ntBASIC1.28□□□□□ -2.21
HSPG2P98160 AC017007.3-201ENST00000479865 435 ntBASIC1.28□□□□□ -2.21
HSPG2P98160 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.28□□□□□ -2.21
HSPG2P98160 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.28□□□□□ -2.21
HSPG2P98160 Y_RNA.783-201ENST00000613546 102 ntBASIC1.28□□□□□ -2.21
HSPG2P98160 AL139811.1-201ENST00000424779 2299 ntBASIC1.28□□□□□ -2.21
HSPG2P98160 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
HSPG2P98160 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
HSPG2P98160 AC234782.4-201ENST00000417646 1048 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 RPS15AP17-201ENST00000470598 390 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 RNU6-250P-201ENST00000516958 103 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.27□□□□□ -2.21
HSPG2P98160 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.27□□□□□ -2.21
HSPG2P98160 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
HSPG2P98160 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HSPG2P98160 AL133412.1-201ENST00000380194 2992 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 SAR1AP2-201ENST00000392696 594 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 AL021407.1-201ENST00000404531 386 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 RNA5SP344-201ENST00000411081 104 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 AL356806.1-201ENST00000422524 916 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.27□□□□□ -2.21
HSPG2P98160 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.27□□□□□ -2.21
HSPG2P98160 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.27□□□□□ -2.21
HSPG2P98160 MLLT10P2-201ENST00000506434 249 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 AC241377.1-201ENST00000619797 406 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 AC092650.2-201ENST00000619984 902 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
HSPG2P98160 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.27□□□□□ -2.21
HSPG2P98160 ZNF542P-204ENST00000482727 1305 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.27□□□□□ -2.21
HSPG2P98160 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.27□□□□□ -2.21
HSPG2P98160 AL049830.2-201ENST00000480072 201 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 HIGD1AP10-201ENST00000527837 282 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 AC005951.1-201ENST00000576706 485 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.27□□□□□ -2.21
HSPG2P98160 AC084768.2-201ENST00000622736 221 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 AL160394.1-201ENST00000624765 724 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 DCAF13P1-201ENST00000495256 1330 ntBASIC1.27□□□□□ -2.21
HSPG2P98160 RPL7P37-201ENST00000425095 738 ntBASIC1.26□□□□□ -2.21
HSPG2P98160 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.26□□□□□ -2.21
HSPG2P98160 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms