Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNU6-796P-201ENST00000391086 107 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 SKINT1L-201ENST00000401057 817 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 ATF1P1-201ENST00000406040 927 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 AL023807.1-201ENST00000407932 359 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 RNU6-712P-201ENST00000410558 100 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 RNA5SP107-201ENST00000411358 122 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 RPS20P25-201ENST00000412447 352 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCNA1P78396 TRIM60P18-201ENST00000441518 828 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 RPS26P30-201ENST00000443431 335 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 RPL32P28-201ENST00000443577 397 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 MTND2P19-201ENST00000449129 1012 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 AL109933.2-201ENST00000452651 260 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 RPS20P24-201ENST00000457473 361 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 AC104472.2-201ENST00000469035 601 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 VPS26AP1-201ENST00000483197 979 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 RN7SL20P-201ENST00000488827 297 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.35□□□□□ -1.87
CCNA1P78396 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.35□□□□□ -1.87
CCNA1P78396 SNRPGP16-201ENST00000533275 226 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.35□□□□□ -1.87
CCNA1P78396 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCNA1P78396 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.35□□□□□ -1.87
CCNA1P78396 AL157394.1-201ENST00000562983 1224 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 AC106734.1-201ENST00000568646 663 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.35□□□□□ -1.87
CCNA1P78396 MIR4435-1-201ENST00000582552 80 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 AC007318.2-201ENST00000620999 243 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 AC022509.4-201ENST00000621404 572 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 IGHVIII-44-202ENST00000636235 289 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 AC130650.2-201ENST00000618736 2403 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCNA1P78396 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCNA1P78396 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.34□□□□□ -1.87
CCNA1P78396 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.34□□□□□ -1.87
CCNA1P78396 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCNA1P78396 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.34□□□□□ -1.87
CCNA1P78396 OR5T3-201ENST00000303059 1023 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 SNORA14A-201ENST00000364773 135 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 FAT1P1-201ENST00000406588 507 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 AL158825.1-201ENST00000414735 521 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNA1P78396 UBE2V1P6-201ENST00000430840 422 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.34□□□□□ -1.87
CCNA1P78396 RPS4XP6-201ENST00000477670 797 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 AC096751.1-202ENST00000502691 1067 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 AC021146.5-201ENST00000503544 545 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 SCARNA20.6-201ENST00000517251 106 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 AC239860.2-201ENST00000525886 270 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 CYCSP39-201ENST00000565821 309 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 MTCO3P24-201ENST00000572729 782 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.34□□□□□ -1.87
CCNA1P78396 AC015871.2-201ENST00000603605 948 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 KATNBL1P5-201ENST00000605015 517 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 AC107294.1-201ENST00000609524 467 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 AC006213.5-201ENST00000619673 288 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNA1P78396 AC098679.5-201ENST00000624394 571 ntBASIC3.34□□□□□ -1.87
CCNA1P78396 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.87
CCNA1P78396 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCNA1P78396 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.34□□□□□ -1.88
CCNA1P78396 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCNA1P78396 SNORD56.4-201ENST00000363883 71 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNA1P78396 RNU6-1074P-201ENST00000383995 104 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.33□□□□□ -1.88
CCNA1P78396 OR51A3P-201ENST00000413596 924 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 RPS7P13-201ENST00000413955 498 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.33□□□□□ -1.88
CCNA1P78396 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNA1P78396 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.33□□□□□ -1.88
CCNA1P78396 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNA1P78396 AC108938.1-201ENST00000451204 136 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 AC108078.3-201ENST00000502633 489 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 KLHL2P1-201ENST00000508691 521 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 ZNF705CP-201ENST00000530515 889 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.33□□□□□ -1.88
CCNA1P78396 AC104229.1-201ENST00000561364 255 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNA1P78396 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.33□□□□□ -1.88
CCNA1P78396 AC011492.1-201ENST00000600023 315 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 AP001330.4-201ENST00000604350 154 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 AL450270.1-201ENST00000606160 391 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNA1P78396 MFSD8-213ENST00000641134 1327 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNA1P78396 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CCNA1P78396 AL359693.1-201ENST00000614959 2407 ntBASIC3.33□□□□□ -1.88
CCNA1P78396 AC233263.6-201ENST00000631132 1963 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.32□□□□□ -1.88
CCNA1P78396 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCNA1P78396 RNU4-82P-201ENST00000362443 140 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCNA1P78396 CYCSP45-201ENST00000402289 315 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 AL133384.1-201ENST00000412744 351 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.32□□□□□ -1.88
CCNA1P78396 UBE2D3P2-201ENST00000424409 445 ntBASIC3.32□□□□□ -1.88
CCNA1P78396 Z93242.1-201ENST00000427102 353 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms