Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MIR320B1-201ENST00000390209 79 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 TRIAP1P1-201ENST00000427062 225 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 NEK4P1-201ENST00000433383 879 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.96□□□□□ -2.1
ABCA4P78363 RPL21P18-201ENST00000469899 480 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 AC006483.1-201ENST00000487308 313 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 RNU2-58P-201ENST00000516403 183 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 RN7SKP82-201ENST00000516786 223 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.96□□□□□ -2.1
ABCA4P78363 AK6P1-201ENST00000540219 478 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.96□□□□□ -2.1
ABCA4P78363 AC135628.1-201ENST00000568867 534 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ABCA4P78363 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.96□□□□□ -2.1
ABCA4P78363 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.96□□□□□ -2.1
ABCA4P78363 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
ABCA4P78363 MIR583-201ENST00000384846 75 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 MIR489-201ENST00000384923 84 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
ABCA4P78363 RN7SKP123-201ENST00000410732 291 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 Z98742.2-201ENST00000431564 187 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.96□□□□□ -2.1
ABCA4P78363 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.96□□□□□ -2.1
ABCA4P78363 GNAI2P1-201ENST00000541815 315 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 SNRPGP18-201ENST00000553000 214 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 AC090695.1-201ENST00000561269 1222 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 AC091046.2-201ENST00000620775 665 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 AL157700.1-201ENST00000561973 1432 ntBASIC1.96□□□□□ -2.1
ABCA4P78363 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC1.95□□□□□ -2.1
ABCA4P78363 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC1.95□□□□□ -2.1
ABCA4P78363 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ABCA4P78363 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
ABCA4P78363 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ABCA4P78363 ARF4P2-201ENST00000430209 526 ntBASIC1.95□□□□□ -2.1
ABCA4P78363 AC091179.1-201ENST00000461606 579 ntBASIC1.95□□□□□ -2.1
ABCA4P78363 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.95□□□□□ -2.1
ABCA4P78363 AP003117.2-201ENST00000606010 545 ntBASIC1.95□□□□□ -2.1
ABCA4P78363 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.95□□□□□ -2.1
ABCA4P78363 AC103710.2-201ENST00000609912 942 ntBASIC1.95□□□□□ -2.1
ABCA4P78363 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
ABCA4P78363 AC011460.1-201ENST00000636268 1834 ntBASIC1.95□□□□□ -2.1
ABCA4P78363 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.95□□□□□ -2.1
ABCA4P78363 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.95□□□□□ -2.1
ABCA4P78363 AC092326.2-201ENST00000624772 1561 ntBASIC1.95□□□□□ -2.1
ABCA4P78363 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ABCA4P78363 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.95□□□□□ -2.1
ABCA4P78363 MIR337-201ENST00000362281 93 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 MT-TP-201ENST00000387461 68 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 ATG3P1-201ENST00000419507 911 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.94□□□□□ -2.1
ABCA4P78363 AL009174.1-201ENST00000426577 416 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ABCA4P78363 AC005912.1-201ENST00000495392 255 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.94□□□□□ -2.1
ABCA4P78363 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ABCA4P78363 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.94□□□□□ -2.1
ABCA4P78363 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.94□□□□□ -2.1
ABCA4P78363 AC010378.1-201ENST00000619270 362 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 AP006437.1-201ENST00000641440 3685 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 MTND4P34-201ENST00000572715 1371 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 MTND5P3-201ENST00000438536 1800 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 HMGB1P10-201ENST00000395823 563 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 AL590004.2-201ENST00000404787 371 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 AP000567.1-201ENST00000406413 156 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.94□□□□□ -2.1
ABCA4P78363 AL353729.1-201ENST00000425044 720 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.94□□□□□ -2.1
ABCA4P78363 AC072039.1-201ENST00000477611 581 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.94□□□□□ -2.1
ABCA4P78363 OR6C73P-201ENST00000546432 358 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 AC023043.2-201ENST00000589678 1026 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.94□□□□□ -2.1
ABCA4P78363 AL451074.6-201ENST00000608512 729 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 MIR1291-201ENST00000627649 87 ntBASIC1.94□□□□□ -2.1
ABCA4P78363 RNU1-17P-201ENST00000363022 152 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.93□□□□□ -2.1
ABCA4P78363 MIR591-201ENST00000385290 95 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 RNU1-101P-201ENST00000391171 127 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 GSTA12P-201ENST00000402398 508 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.93□□□□□ -2.1
ABCA4P78363 CYCSP49-201ENST00000420810 319 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.93□□□□□ -2.1
ABCA4P78363 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.93□□□□□ -2.1
ABCA4P78363 RPL23AP44-201ENST00000482216 473 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.93□□□□□ -2.1
ABCA4P78363 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.93□□□□□ -2.1
ABCA4P78363 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.93□□□□□ -2.1
ABCA4P78363 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.93□□□□□ -2.1
ABCA4P78363 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.93□□□□□ -2.1
ABCA4P78363 AC138649.5-201ENST00000637456 137 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
ABCA4P78363 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ABCA4P78363 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ABCA4P78363 AC011978.2-201ENST00000569835 2054 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 Y_RNA.796-201ENST00000364268 102 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 SNORA7.2-201ENST00000364446 145 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 Y_RNA.799-201ENST00000364992 102 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 RPL31P2-201ENST00000413849 377 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 MTCO1P43-201ENST00000431831 488 ntBASIC1.93□□□□□ -2.1
ABCA4P78363 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms