Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
YBX1P67809 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
YBX1P67809 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
YBX1P67809 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
YBX1P67809 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
YBX1P67809 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.84□□□□□ -1.63
YBX1P67809 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
YBX1P67809 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.84□□□□□ -1.63
YBX1P67809 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
YBX1P67809 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
YBX1P67809 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
YBX1P67809 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
YBX1P67809 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
YBX1P67809 MTND5P10-201ENST00000603719 1809 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AC011460.1-201ENST00000636268 1834 ntBASIC4.84□□□□□ -1.63
YBX1P67809 DHX40P1-201ENST00000588725 1412 ntBASIC4.84□□□□□ -1.63
YBX1P67809 ELL2P4-201ENST00000446870 1376 ntBASIC4.84□□□□□ -1.63
YBX1P67809 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
YBX1P67809 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.84□□□□□ -1.63
YBX1P67809 RNA5SP305-201ENST00000362665 119 ntBASIC4.84□□□□□ -1.63
YBX1P67809 RN7SKP113-201ENST00000363891 295 ntBASIC4.84□□□□□ -1.63
YBX1P67809 U3.20-201ENST00000390909 217 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AL024474.1-201ENST00000404655 591 ntBASIC4.84□□□□□ -1.63
YBX1P67809 OR6C66P-201ENST00000414917 930 ntBASIC4.84□□□□□ -1.63
YBX1P67809 ARL5AP1-201ENST00000418991 388 ntBASIC4.84□□□□□ -1.63
YBX1P67809 RPL7L1P10-201ENST00000427790 463 ntBASIC4.84□□□□□ -1.63
YBX1P67809 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
YBX1P67809 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.84□□□□□ -1.63
YBX1P67809 AL450023.3-201ENST00000440592 271 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AL731563.1-201ENST00000442202 214 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AL691482.1-201ENST00000453255 87 ntBASIC4.84□□□□□ -1.63
YBX1P67809 snoU13.8-201ENST00000458890 104 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AC092436.1-201ENST00000506450 503 ntBASIC4.84□□□□□ -1.63
YBX1P67809 COX6B1P5-201ENST00000509843 249 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AC098591.2-201ENST00000510152 315 ntBASIC4.84□□□□□ -1.63
YBX1P67809 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.84□□□□□ -1.63
YBX1P67809 AL671862.1-201ENST00000515851 349 ntBASIC4.84□□□□□ -1.63
YBX1P67809 RNU6-513P-201ENST00000516104 104 ntBASIC4.84□□□□□ -1.63
YBX1P67809 RN7SKP295-201ENST00000517264 153 ntBASIC4.84□□□□□ -1.63
YBX1P67809 RANP9-201ENST00000519957 271 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.84□□□□□ -1.63
YBX1P67809 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.84□□□□□ -1.63
YBX1P67809 AP005435.4-201ENST00000529514 284 ntBASIC4.84□□□□□ -1.63
YBX1P67809 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.84□□□□□ -1.63
YBX1P67809 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.84□□□□□ -1.63
YBX1P67809 SETP2-201ENST00000553886 926 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.84□□□□□ -1.63
YBX1P67809 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.84□□□□□ -1.63
YBX1P67809 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.84□□□□□ -1.63
YBX1P67809 MIR4472-2-201ENST00000582069 67 ntBASIC4.84□□□□□ -1.63
YBX1P67809 MIR5690-201ENST00000583739 73 ntBASIC4.84□□□□□ -1.63
YBX1P67809 MIR3936-201ENST00000584304 110 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.84□□□□□ -1.63
YBX1P67809 UBE2L4-201ENST00000587688 464 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AL592436.1-201ENST00000605135 558 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AC022893.3-201ENST00000607665 437 ntBASIC4.84□□□□□ -1.63
YBX1P67809 AC100827.5-201ENST00000615883 426 ntBASIC4.84□□□□□ -1.63
YBX1P67809 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
YBX1P67809 OR52H1-202ENST00000641796 1061 ntBASIC4.84□□□□□ -1.63
YBX1P67809 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
YBX1P67809 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
YBX1P67809 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
YBX1P67809 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
YBX1P67809 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
YBX1P67809 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
YBX1P67809 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
YBX1P67809 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
YBX1P67809 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
YBX1P67809 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
YBX1P67809 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
YBX1P67809 PCAT14-202ENST00000627127 3935 ntBASIC4.83□□□□□ -1.64
YBX1P67809 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
YBX1P67809 IRF5P1-201ENST00000504852 2164 ntBASIC4.83□□□□□ -1.64
YBX1P67809 HSPE1P11-201ENST00000339579 310 ntBASIC4.83□□□□□ -1.64
YBX1P67809 RPL32P3-201ENST00000359025 275 ntBASIC4.83□□□□□ -1.64
YBX1P67809 RNU6-1252P-201ENST00000363054 104 ntBASIC4.83□□□□□ -1.64
YBX1P67809 Y_RNA.112-201ENST00000363250 102 ntBASIC4.83□□□□□ -1.64
YBX1P67809 Y_RNA.234-201ENST00000364409 97 ntBASIC4.83□□□□□ -1.64
YBX1P67809 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.83□□□□□ -1.64
YBX1P67809 SNORA66-201ENST00000384792 133 ntBASIC4.83□□□□□ -1.64
YBX1P67809 MIR558-201ENST00000384920 94 ntBASIC4.83□□□□□ -1.64
YBX1P67809 MIR141-201ENST00000384975 95 ntBASIC4.83□□□□□ -1.64
YBX1P67809 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
YBX1P67809 AL109941.1-201ENST00000401925 229 ntBASIC4.83□□□□□ -1.64
YBX1P67809 RNU2-29P-201ENST00000410423 189 ntBASIC4.83□□□□□ -1.64
YBX1P67809 RN7SKP158-201ENST00000410453 326 ntBASIC4.83□□□□□ -1.64
YBX1P67809 Y_RNA.618-201ENST00000410949 107 ntBASIC4.83□□□□□ -1.64
YBX1P67809 RN7SKP247-201ENST00000411094 308 ntBASIC4.83□□□□□ -1.64
YBX1P67809 RPS12P24-201ENST00000412619 387 ntBASIC4.83□□□□□ -1.64
YBX1P67809 AF186996.5-201ENST00000418098 904 ntBASIC4.83□□□□□ -1.64
YBX1P67809 AC099336.2-201ENST00000422457 254 ntBASIC4.83□□□□□ -1.64
YBX1P67809 DDX39BP1-205ENST00000422507 192 ntBASIC4.83□□□□□ -1.64
YBX1P67809 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.83□□□□□ -1.64
YBX1P67809 COX6CP13-201ENST00000428703 226 ntBASIC4.83□□□□□ -1.64
YBX1P67809 CBX3P6-201ENST00000430257 527 ntBASIC4.83□□□□□ -1.64
YBX1P67809 UBE2V1P13-201ENST00000436983 439 ntBASIC4.83□□□□□ -1.64
YBX1P67809 AC108734.1-201ENST00000439549 399 ntBASIC4.83□□□□□ -1.64
YBX1P67809 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.83□□□□□ -1.64
YBX1P67809 Z98949.2-201ENST00000440996 144 ntBASIC4.83□□□□□ -1.64
YBX1P67809 TXNP1-201ENST00000441872 371 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms