Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
VBP1P61758 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.35□□□□□ -2.03
VBP1P61758 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.35□□□□□ -2.03
VBP1P61758 FNDC3CP-201ENST00000420795 1155 ntBASIC2.35□□□□□ -2.03
VBP1P61758 ARL2BPP3-201ENST00000421226 480 ntBASIC2.35□□□□□ -2.03
VBP1P61758 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.35□□□□□ -2.03
VBP1P61758 RSL24D1P6-201ENST00000426934 401 ntBASIC2.35□□□□□ -2.03
VBP1P61758 AC009414.1-201ENST00000427200 443 ntBASIC2.35□□□□□ -2.03
VBP1P61758 AC006028.1-201ENST00000438379 402 ntBASIC2.35□□□□□ -2.03
VBP1P61758 MTCO3P17-201ENST00000443775 513 ntBASIC2.35□□□□□ -2.03
VBP1P61758 COX6CP12-201ENST00000446748 202 ntBASIC2.35□□□□□ -2.03
VBP1P61758 MTND2P19-201ENST00000449129 1012 ntBASIC2.35□□□□□ -2.03
VBP1P61758 AC126182.1-201ENST00000478134 357 ntBASIC2.35□□□□□ -2.03
VBP1P61758 NDUFB4P2-201ENST00000509515 391 ntBASIC2.35□□□□□ -2.03
VBP1P61758 AC008885.1-201ENST00000514930 301 ntBASIC2.35□□□□□ -2.03
VBP1P61758 SCGB1D5P-201ENST00000515134 247 ntBASIC2.35□□□□□ -2.03
VBP1P61758 CDH12P4-201ENST00000517835 295 ntBASIC2.35□□□□□ -2.03
VBP1P61758 CDH12P3-201ENST00000517935 295 ntBASIC2.35□□□□□ -2.03
VBP1P61758 CDH12P1-201ENST00000518435 295 ntBASIC2.35□□□□□ -2.03
VBP1P61758 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VBP1P61758 AP003102.1-201ENST00000525638 661 ntBASIC2.35□□□□□ -2.03
VBP1P61758 C1DP5-201ENST00000525775 383 ntBASIC2.35□□□□□ -2.03
VBP1P61758 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.35□□□□□ -2.03
VBP1P61758 PRELID2P1-201ENST00000552837 301 ntBASIC2.35□□□□□ -2.03
VBP1P61758 AC017100.2-201ENST00000584628 355 ntBASIC2.35□□□□□ -2.03
VBP1P61758 AC119501.1-201ENST00000603646 475 ntBASIC2.35□□□□□ -2.03
VBP1P61758 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VBP1P61758 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.35□□□□□ -2.03
VBP1P61758 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.35□□□□□ -2.03
VBP1P61758 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.35□□□□□ -2.03
VBP1P61758 AC027309.3-201ENST00000623419 351 ntBASIC2.35□□□□□ -2.03
VBP1P61758 AL137003.2-201ENST00000606924 2538 ntBASIC2.35□□□□□ -2.03
VBP1P61758 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
VBP1P61758 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
VBP1P61758 MIR767-201ENST00000390228 109 ntBASIC2.34□□□□□ -2.03
VBP1P61758 RAB28P1-201ENST00000411517 641 ntBASIC2.34□□□□□ -2.03
VBP1P61758 MTCO3P30-201ENST00000426425 670 ntBASIC2.34□□□□□ -2.03
VBP1P61758 AL365496.1-201ENST00000426885 215 ntBASIC2.34□□□□□ -2.03
VBP1P61758 ARPC3P1-201ENST00000437218 533 ntBASIC2.34□□□□□ -2.03
VBP1P61758 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.34□□□□□ -2.03
VBP1P61758 NDUFA5P9-201ENST00000472609 340 ntBASIC2.34□□□□□ -2.03
VBP1P61758 EIF4EP3-201ENST00000498782 656 ntBASIC2.34□□□□□ -2.03
VBP1P61758 PRELID3BP5-201ENST00000508612 460 ntBASIC2.34□□□□□ -2.03
VBP1P61758 SNORA31.18-201ENST00000517043 134 ntBASIC2.34□□□□□ -2.03
VBP1P61758 AC009812.2-201ENST00000517657 457 ntBASIC2.34□□□□□ -2.03
VBP1P61758 CKS1BP7-201ENST00000522230 235 ntBASIC2.34□□□□□ -2.03
VBP1P61758 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VBP1P61758 GLYCAM1-201ENST00000546596 285 ntBASIC2.34□□□□□ -2.03
VBP1P61758 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.34□□□□□ -2.03
VBP1P61758 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.34□□□□□ -2.03
VBP1P61758 MIR3616-201ENST00000584070 92 ntBASIC2.34□□□□□ -2.03
VBP1P61758 AL606834.2-201ENST00000602954 668 ntBASIC2.34□□□□□ -2.03
VBP1P61758 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.34□□□□□ -2.03
VBP1P61758 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.34□□□□□ -2.03
VBP1P61758 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.34□□□□□ -2.03
VBP1P61758 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.34□□□□□ -2.03
VBP1P61758 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
VBP1P61758 AC068620.4-201ENST00000636730 1182 ntBASIC2.34□□□□□ -2.03
VBP1P61758 AC022336.2-201ENST00000568966 2538 ntBASIC2.34□□□□□ -2.04
VBP1P61758 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
VBP1P61758 AL022578.1-201ENST00000439330 1433 ntBASIC2.34□□□□□ -2.04
VBP1P61758 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
VBP1P61758 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VBP1P61758 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.33□□□□□ -2.04
VBP1P61758 RNU6-173P-201ENST00000364215 104 ntBASIC2.33□□□□□ -2.04
VBP1P61758 SNORA68.1-201ENST00000364537 132 ntBASIC2.33□□□□□ -2.04
VBP1P61758 RNU1-100P-201ENST00000365255 165 ntBASIC2.33□□□□□ -2.04
VBP1P61758 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.33□□□□□ -2.04
VBP1P61758 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC2.33□□□□□ -2.04
VBP1P61758 HMGN2P31-201ENST00000432430 273 ntBASIC2.33□□□□□ -2.04
VBP1P61758 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.33□□□□□ -2.04
VBP1P61758 UBE2V1P13-201ENST00000436983 439 ntBASIC2.33□□□□□ -2.04
VBP1P61758 AC004865.1-201ENST00000442276 1003 ntBASIC2.33□□□□□ -2.04
VBP1P61758 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.33□□□□□ -2.04
VBP1P61758 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.33□□□□□ -2.04
VBP1P61758 BX248409.1-201ENST00000455497 255 ntBASIC2.33□□□□□ -2.04
VBP1P61758 AC087588.1-201ENST00000462203 316 ntBASIC2.33□□□□□ -2.04
VBP1P61758 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.33□□□□□ -2.04
VBP1P61758 AC026403.1-201ENST00000518938 295 ntBASIC2.33□□□□□ -2.04
VBP1P61758 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.33□□□□□ -2.04
VBP1P61758 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VBP1P61758 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.33□□□□□ -2.04
VBP1P61758 MIR5092-201ENST00000583139 88 ntBASIC2.33□□□□□ -2.04
VBP1P61758 BNIP3P11-201ENST00000603878 563 ntBASIC2.33□□□□□ -2.04
VBP1P61758 AC004852.3-201ENST00000614131 326 ntBASIC2.33□□□□□ -2.04
VBP1P61758 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.33□□□□□ -2.04
VBP1P61758 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.33□□□□□ -2.04
VBP1P61758 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VBP1P61758 AC096644.4-201ENST00000563417 2912 ntBASIC2.32□□□□□ -2.04
VBP1P61758 AL049780.3-201ENST00000624612 1583 ntBASIC2.32□□□□□ -2.04
VBP1P61758 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
VBP1P61758 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.32□□□□□ -2.04
VBP1P61758 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VBP1P61758 SNORA38-201ENST00000363946 132 ntBASIC2.32□□□□□ -2.04
VBP1P61758 RNU1-85P-201ENST00000364127 164 ntBASIC2.32□□□□□ -2.04
VBP1P61758 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VBP1P61758 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
VBP1P61758 RNU6-851P-201ENST00000384565 107 ntBASIC2.32□□□□□ -2.04
VBP1P61758 SNORA48.5-201ENST00000391143 135 ntBASIC2.32□□□□□ -2.04
VBP1P61758 AL355497.1-201ENST00000406262 551 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms