Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC090582.1-201ENST00000636321 199 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN20P56880 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN20P56880 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CLDN20P56880 AL049780.3-201ENST00000624612 1583 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 DCAF13P1-201ENST00000495256 1330 ntBASIC3.62□□□□□ -1.83
CLDN20P56880 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN20P56880 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.62□□□□□ -1.83
CLDN20P56880 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CLDN20P56880 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN20P56880 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN20P56880 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN20P56880 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN20P56880 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CLDN20P56880 FGF7P2-201ENST00000332473 296 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN20P56880 RNU6-623P-201ENST00000363143 105 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN20P56880 RNU6-837P-201ENST00000391056 108 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AL356421.1-201ENST00000403255 413 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 RNA5SP239-201ENST00000410218 129 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN20P56880 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN20P56880 AC245052.5-201ENST00000416320 649 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN20P56880 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN20P56880 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN20P56880 MTCO3P5-201ENST00000433620 714 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN20P56880 AC096638.2-201ENST00000434965 711 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AL353706.1-201ENST00000436728 494 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 GDI2P2-201ENST00000445131 608 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN20P56880 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN20P56880 AL353691.1-201ENST00000451332 387 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN20P56880 TPTE2P5-203ENST00000458118 728 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AC006390.1-201ENST00000508068 283 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AC021146.1-201ENST00000511202 716 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN20P56880 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN20P56880 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN20P56880 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN20P56880 OR4P1P-201ENST00000530808 1136 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN20P56880 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
CLDN20P56880 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN20P56880 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.61□□□□□ -1.83
CLDN20P56880 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN20P56880 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN20P56880 AC119751.7-201ENST00000600494 245 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AC004853.1-201ENST00000604902 698 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN20P56880 AL365503.1-201ENST00000605247 905 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AC087752.4-201ENST00000605911 462 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 AC027807.2-201ENST00000616099 408 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 MIR6500-201ENST00000622700 86 ntBASIC3.61□□□□□ -1.83
CLDN20P56880 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN20P56880 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.61□□□□□ -1.83
CLDN20P56880 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN20P56880 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CLDN20P56880 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN20P56880 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 IPO8P1-201ENST00000455509 3109 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN20P56880 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN20P56880 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN20P56880 AC090337.1-201ENST00000579651 2074 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CLDN20P56880 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN20P56880 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 RNU5E-5P-201ENST00000365379 116 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 U3.15-201ENST00000365398 212 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 RNU4-78P-201ENST00000410940 126 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN20P56880 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN20P56880 AIMP1P1-201ENST00000418670 937 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 Z97055.1-201ENST00000419730 712 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN20P56880 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 OR8F1P-201ENST00000425243 930 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN20P56880 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN20P56880 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.6□□□□□ -1.83
CLDN20P56880 RPL7P36-201ENST00000444633 681 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 AC239367.2-201ENST00000447309 705 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 AL592447.1-201ENST00000447592 540 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 ST13P20-201ENST00000447996 1065 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN20P56880 SNRPFP4-201ENST00000456366 242 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 BTF3P5-201ENST00000457252 467 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 HMGB1P25-201ENST00000468402 607 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN20P56880 MTCO3P7-201ENST00000510008 774 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN20P56880 RNU6-714P-201ENST00000516963 103 ntBASIC3.6□□□□□ -1.83
CLDN20P56880 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN20P56880 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN20P56880 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN20P56880 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms