Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 ZNF114P1-201ENST00000453500 292 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.04□□□□□ -1.76
HDAC4P56524 RNU7-136P-201ENST00000458819 69 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 snoU13.24-201ENST00000458998 104 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC087312.1-201ENST00000471411 480 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 RAP1BP2-201ENST00000478270 544 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 FAM172BP-201ENST00000487497 1089 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC090453.1-201ENST00000495560 436 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 MTND5P13-201ENST00000513046 1079 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 MTND4LP31-201ENST00000514859 294 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC023632.4-201ENST00000517783 191 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC4P56524 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 AP004242.1-201ENST00000533701 349 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC4P56524 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC4P56524 GTF2IP22-201ENST00000554443 182 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC4P56524 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC4P56524 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC4P56524 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC4P56524 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC4P56524 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC4P56524 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC4P56524 SNRPGP15-201ENST00000600149 222 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AL031985.2-201ENST00000600955 480 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AF131215.7-201ENST00000602443 707 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC008739.3-201ENST00000603262 127 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC024220.1-201ENST00000603675 484 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 MTCYBP22-201ENST00000603788 447 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AC073968.1-201ENST00000618594 637 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
HDAC4P56524 AC139792.2-201ENST00000624218 587 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 AL356596.1-201ENST00000624230 379 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.04□□□□□ -1.76
HDAC4P56524 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HDAC4P56524 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDAC4P56524 AL157700.1-201ENST00000561973 1432 ntBASIC4.04□□□□□ -1.76
HDAC4P56524 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HDAC4P56524 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HDAC4P56524 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.03□□□□□ -1.76
HDAC4P56524 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC4P56524 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HDAC4P56524 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HDAC4P56524 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HDAC4P56524 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HDAC4P56524 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HDAC4P56524 RNU6-777P-201ENST00000364265 104 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 RNU6-761P-201ENST00000384148 107 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HDAC4P56524 RPS3AP26-201ENST00000398259 784 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC4P56524 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC4P56524 Z99497.1-201ENST00000421282 135 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AL513174.1-201ENST00000423182 629 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AC010153.1-201ENST00000432862 727 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.03□□□□□ -1.76
HDAC4P56524 AC127537.2-201ENST00000439258 465 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 TRIM60P18-201ENST00000441518 828 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC4P56524 EPS15P1-201ENST00000448836 336 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 HMGB3P8-201ENST00000449709 577 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC4P56524 RPL21P11-201ENST00000461458 483 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 MTND4LP3-201ENST00000468320 276 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC4P56524 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC4P56524 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC4P56524 AC005921.1-201ENST00000510589 286 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC4P56524 RNU2-58P-201ENST00000516403 183 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 RNU6-352P-201ENST00000516908 107 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 HIGD1AP10-201ENST00000527837 282 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HDAC4P56524 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.03□□□□□ -1.76
HDAC4P56524 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.03□□□□□ -1.76
HDAC4P56524 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC4P56524 AL121766.1-201ENST00000547436 487 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 OR6C7P-201ENST00000547875 934 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC4P56524 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC4P56524 AC090877.1-201ENST00000561418 344 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 ACTR3BP3-201ENST00000565577 979 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.03□□□□□ -1.76
HDAC4P56524 AC012414.6-201ENST00000568241 401 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 MTCYBP33-201ENST00000575007 1130 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC4P56524 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC4P56524 AC073114.1-201ENST00000612027 490 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 MIR7844-201ENST00000616161 122 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 MIR6875-201ENST00000617506 72 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 AL356266.1-201ENST00000623311 483 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms