Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNU6-1077P-201ENST00000410506 102 ntBASIC3.04□□□□□ -1.92
CDH6P55285 RN7SKP58-201ENST00000411010 305 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH6P55285 FCF1P2-201ENST00000415284 583 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH6P55285 SFR1P2-201ENST00000421841 730 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AC104332.2-201ENST00000429959 156 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AC005345.1-201ENST00000431868 217 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH6P55285 AC244505.4-201ENST00000434905 287 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH6P55285 MTCYBP34-201ENST00000439552 670 ntBASIC3.04□□□□□ -1.92
CDH6P55285 SSXP5-201ENST00000443473 287 ntBASIC3.04□□□□□ -1.92
CDH6P55285 RPL37P4-201ENST00000448908 268 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.04□□□□□ -1.92
CDH6P55285 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH6P55285 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH6P55285 COL6A4P2-205ENST00000509855 506 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH6P55285 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH6P55285 AC022690.1-201ENST00000526681 550 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH6P55285 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH6P55285 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH6P55285 EEF1B2P4-201ENST00000551398 348 ntBASIC3.04□□□□□ -1.92
CDH6P55285 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH6P55285 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH6P55285 AC034105.3-201ENST00000565294 442 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AC093519.1-201ENST00000566109 298 ntBASIC3.04□□□□□ -1.92
CDH6P55285 COX6CP3-201ENST00000580869 223 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH6P55285 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH6P55285 AC083760.1-201ENST00000589621 670 ntBASIC3.04□□□□□ -1.92
CDH6P55285 BDH2P1-201ENST00000602288 736 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.04□□□□□ -1.92
CDH6P55285 AP001330.4-201ENST00000604350 154 ntBASIC3.04□□□□□ -1.92
CDH6P55285 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AC090617.7-201ENST00000623952 126 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AL512506.2-201ENST00000624472 458 ntBASIC3.04□□□□□ -1.92
CDH6P55285 AC009039.2-201ENST00000624524 529 ntBASIC3.04□□□□□ -1.92
CDH6P55285 BX649567.1-201ENST00000642071 1134 ntBASIC3.04□□□□□ -1.92
CDH6P55285 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CDH6P55285 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
CDH6P55285 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH6P55285 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH6P55285 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH6P55285 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDH6P55285 RNU6-582P-201ENST00000362989 107 ntBASIC3.03□□□□□ -1.92
CDH6P55285 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDH6P55285 U6.112-201ENST00000384129 70 ntBASIC3.03□□□□□ -1.92
CDH6P55285 U3.29-201ENST00000391296 212 ntBASIC3.03□□□□□ -1.92
CDH6P55285 CYCSP45-201ENST00000402289 315 ntBASIC3.03□□□□□ -1.92
CDH6P55285 PTGES3P2-201ENST00000407942 482 ntBASIC3.03□□□□□ -1.92
CDH6P55285 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.03□□□□□ -1.92
CDH6P55285 AL024507.1-201ENST00000412741 274 ntBASIC3.03□□□□□ -1.92
CDH6P55285 TAF13P2-201ENST00000416876 286 ntBASIC3.03□□□□□ -1.92
CDH6P55285 SDCBPP3-201ENST00000419629 891 ntBASIC3.03□□□□□ -1.92
CDH6P55285 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH6P55285 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH6P55285 UBE2D3P2-201ENST00000424409 445 ntBASIC3.03□□□□□ -1.92
CDH6P55285 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH6P55285 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH6P55285 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH6P55285 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.03□□□□□ -1.92
CDH6P55285 AL158053.1-201ENST00000441503 453 ntBASIC3.03□□□□□ -1.92
CDH6P55285 RPS3AP12-201ENST00000443616 753 ntBASIC3.03□□□□□ -1.92
CDH6P55285 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH6P55285 AL671855.1-201ENST00000446875 1203 ntBASIC3.03□□□□□ -1.92
CDH6P55285 RPL23AP31-201ENST00000456160 467 ntBASIC3.03□□□□□ -1.92
CDH6P55285 snoU109.4-201ENST00000458953 143 ntBASIC3.03□□□□□ -1.92
CDH6P55285 AC104472.2-201ENST00000469035 601 ntBASIC3.03□□□□□ -1.92
CDH6P55285 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH6P55285 AC118282.1-201ENST00000506408 765 ntBASIC3.03□□□□□ -1.92
CDH6P55285 KLHL2P1-201ENST00000508691 521 ntBASIC3.03□□□□□ -1.92
CDH6P55285 FAM60DP-201ENST00000524174 632 ntBASIC3.03□□□□□ -1.92
CDH6P55285 OR4P1P-201ENST00000530808 1136 ntBASIC3.03□□□□□ -1.92
CDH6P55285 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH6P55285 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH6P55285 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.03□□□□□ -1.92
CDH6P55285 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
CDH6P55285 SULT1C2P1-202ENST00000562418 459 ntBASIC3.03□□□□□ -1.92
CDH6P55285 MIR4325-201ENST00000583049 90 ntBASIC3.03□□□□□ -1.92
CDH6P55285 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH6P55285 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH6P55285 AC078899.3-201ENST00000599065 212 ntBASIC3.03□□□□□ -1.92
CDH6P55285 AC096947.1-201ENST00000603233 470 ntBASIC3.03□□□□□ -1.92
CDH6P55285 AC008962.1-201ENST00000605729 304 ntBASIC3.03□□□□□ -1.92
CDH6P55285 AL021368.1-201ENST00000607490 540 ntBASIC3.03□□□□□ -1.92
CDH6P55285 CYCSP41-201ENST00000616920 296 ntBASIC3.03□□□□□ -1.92
CDH6P55285 AC002076.2-201ENST00000617362 122 ntBASIC3.03□□□□□ -1.92
CDH6P55285 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH6P55285 AC090897.3-201ENST00000636973 1157 ntBASIC3.03□□□□□ -1.92
CDH6P55285 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CDH6P55285 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.03□□□□□ -1.93
CDH6P55285 AC000403.1-201ENST00000613696 3585 ntBASIC3.02□□□□□ -1.93
CDH6P55285 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH6P55285 AC008264.2-201ENST00000610193 3731 ntBASIC3.02□□□□□ -1.93
CDH6P55285 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDH6P55285 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH6P55285 RNU1-35P-201ENST00000362782 153 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms