Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 OR5H4P-201ENST00000510851 923 ntBASIC2.59□□□□□ -1.99
NUP98P52948 RNA5SP385-201ENST00000515947 110 ntBASIC2.59□□□□□ -1.99
NUP98P52948 RN7SKP82-201ENST00000516786 223 ntBASIC2.59□□□□□ -1.99
NUP98P52948 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
NUP98P52948 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.59□□□□□ -1.99
NUP98P52948 AC019227.1-201ENST00000526902 510 ntBASIC2.59□□□□□ -1.99
NUP98P52948 OR4U1P-201ENST00000554958 912 ntBASIC2.59□□□□□ -1.99
NUP98P52948 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.59□□□□□ -1.99
NUP98P52948 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.59□□□□□ -1.99
NUP98P52948 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NUP98P52948 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NUP98P52948 RNU6-1251P-201ENST00000364502 107 ntBASIC2.58□□□□□ -2
NUP98P52948 AC013404.1-201ENST00000413068 249 ntBASIC2.58□□□□□ -2
NUP98P52948 ARF4P2-201ENST00000430209 526 ntBASIC2.58□□□□□ -2
NUP98P52948 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.58□□□□□ -2
NUP98P52948 RPS7P5-201ENST00000441482 581 ntBASIC2.58□□□□□ -2
NUP98P52948 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.58□□□□□ -2
NUP98P52948 TPMTP4-201ENST00000450749 678 ntBASIC2.58□□□□□ -2
NUP98P52948 AC146507.1-201ENST00000468335 354 ntBASIC2.58□□□□□ -2
NUP98P52948 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.58□□□□□ -2
NUP98P52948 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.58□□□□□ -2
NUP98P52948 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.58□□□□□ -2
NUP98P52948 OR5D17P-201ENST00000531492 978 ntBASIC2.58□□□□□ -2
NUP98P52948 AC015712.3-201ENST00000559380 164 ntBASIC2.58□□□□□ -2
NUP98P52948 VN1R9P-201ENST00000614184 867 ntBASIC2.58□□□□□ -2
NUP98P52948 MIR6132-201ENST00000622083 109 ntBASIC2.58□□□□□ -2
NUP98P52948 U6.98-201ENST00000637157 84 ntBASIC2.58□□□□□ -2
NUP98P52948 AC022336.2-201ENST00000568966 2538 ntBASIC2.58□□□□□ -2
NUP98P52948 ZNF72P-201ENST00000425869 1908 ntBASIC2.58□□□□□ -2
NUP98P52948 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
NUP98P52948 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
NUP98P52948 PRELID3BP11-201ENST00000414230 479 ntBASIC2.58□□□□□ -2
NUP98P52948 RPS27AP9-201ENST00000477681 438 ntBASIC2.58□□□□□ -2
NUP98P52948 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.58□□□□□ -2
NUP98P52948 RNU2-58P-201ENST00000516403 183 ntBASIC2.58□□□□□ -2
NUP98P52948 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.58□□□□□ -2
NUP98P52948 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
NUP98P52948 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
NUP98P52948 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
NUP98P52948 AC007687.1-201ENST00000602704 304 ntBASIC2.58□□□□□ -2
NUP98P52948 AP004247.3-201ENST00000608682 624 ntBASIC2.58□□□□□ -2
NUP98P52948 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
NUP98P52948 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
NUP98P52948 SEPT7P7-201ENST00000420492 1301 ntBASIC2.57□□□□□ -2
NUP98P52948 MTND4P35-201ENST00000604257 1375 ntBASIC2.57□□□□□ -2
NUP98P52948 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NUP98P52948 AL121882.1-201ENST00000422893 417 ntBASIC2.57□□□□□ -2
NUP98P52948 AL138799.3-201ENST00000438968 350 ntBASIC2.57□□□□□ -2
NUP98P52948 AC003989.2-201ENST00000440224 169 ntBASIC2.57□□□□□ -2
NUP98P52948 CBWD4P-201ENST00000445695 655 ntBASIC2.57□□□□□ -2
NUP98P52948 MTND2P8-201ENST00000450555 1025 ntBASIC2.57□□□□□ -2
NUP98P52948 AL445669.2-201ENST00000454425 421 ntBASIC2.57□□□□□ -2
NUP98P52948 RPL31P53-201ENST00000457065 348 ntBASIC2.57□□□□□ -2
NUP98P52948 RPL23AP42-201ENST00000471152 471 ntBASIC2.57□□□□□ -2
NUP98P52948 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.57□□□□□ -2
NUP98P52948 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.57□□□□□ -2
NUP98P52948 AC011468.4-201ENST00000603942 409 ntBASIC2.57□□□□□ -2
NUP98P52948 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
NUP98P52948 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.57□□□□□ -2
NUP98P52948 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.57□□□□□ -2
NUP98P52948 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NUP98P52948 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
NUP98P52948 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.57□□□□□ -2
NUP98P52948 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.56□□□□□ -2
NUP98P52948 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.56□□□□□ -2
NUP98P52948 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUP98P52948 SNORD65-201ENST00000391079 73 ntBASIC2.56□□□□□ -2
NUP98P52948 RNU2-37P-201ENST00000410695 177 ntBASIC2.56□□□□□ -2
NUP98P52948 AC005005.2-201ENST00000420779 380 ntBASIC2.56□□□□□ -2
NUP98P52948 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.56□□□□□ -2
NUP98P52948 BUD31P2-201ENST00000449374 300 ntBASIC2.56□□□□□ -2
NUP98P52948 AP001960.1-201ENST00000506494 658 ntBASIC2.56□□□□□ -2
NUP98P52948 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.56□□□□□ -2
NUP98P52948 TBCAP3-201ENST00000512475 312 ntBASIC2.56□□□□□ -2
NUP98P52948 AP003117.2-201ENST00000606010 545 ntBASIC2.56□□□□□ -2
NUP98P52948 RMST_5.1-201ENST00000618704 126 ntBASIC2.56□□□□□ -2
NUP98P52948 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.56□□□□□ -2
NUP98P52948 MTND5P28-201ENST00000438005 1594 ntBASIC2.56□□□□□ -2
NUP98P52948 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.56□□□□□ -2
NUP98P52948 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.56□□□□□ -2
NUP98P52948 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.56□□□□□ -2
NUP98P52948 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUP98P52948 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NUP98P52948 AL356292.1-201ENST00000283110 373 ntBASIC2.56□□□□□ -2
NUP98P52948 RNU6-482P-201ENST00000391068 107 ntBASIC2.56□□□□□ -2
NUP98P52948 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.56□□□□□ -2
NUP98P52948 AL096701.2-201ENST00000416920 238 ntBASIC2.56□□□□□ -2
NUP98P52948 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.56□□□□□ -2
NUP98P52948 ATP5F1P1-201ENST00000433775 569 ntBASIC2.56□□□□□ -2
NUP98P52948 ELOCP11-201ENST00000436690 332 ntBASIC2.56□□□□□ -2
NUP98P52948 ELOCP16-201ENST00000444494 332 ntBASIC2.56□□□□□ -2
NUP98P52948 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.56□□□□□ -2
NUP98P52948 MTCYBP14-201ENST00000457471 715 ntBASIC2.56□□□□□ -2
NUP98P52948 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.56□□□□□ -2
NUP98P52948 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.56□□□□□ -2
NUP98P52948 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.56□□□□□ -2
NUP98P52948 AC113398.2-201ENST00000507630 558 ntBASIC2.56□□□□□ -2
NUP98P52948 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.56□□□□□ -2
NUP98P52948 RN7SKP244-201ENST00000516513 307 ntBASIC2.56□□□□□ -2
NUP98P52948 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms