Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.56□□□□□ -1.84
PDX1P52945 MTCYBP45-201ENST00000435243 565 ntBASIC3.56□□□□□ -1.84
PDX1P52945 MTND5P14-201ENST00000441481 1267 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.56□□□□□ -1.84
PDX1P52945 ARPC3P5-201ENST00000448802 534 ntBASIC3.56□□□□□ -1.84
PDX1P52945 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.56□□□□□ -1.84
PDX1P52945 AL445669.2-201ENST00000454425 421 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AC084198.1-201ENST00000477747 402 ntBASIC3.56□□□□□ -1.84
PDX1P52945 RPS3AP43-201ENST00000479743 781 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AC010486.3-201ENST00000511602 785 ntBASIC3.56□□□□□ -1.84
PDX1P52945 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDX1P52945 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.56□□□□□ -1.84
PDX1P52945 AC093677.1-201ENST00000514414 678 ntBASIC3.56□□□□□ -1.84
PDX1P52945 RN7SKP116-201ENST00000516902 319 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AP003385.6-201ENST00000531603 374 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.56□□□□□ -1.84
PDX1P52945 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDX1P52945 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.56□□□□□ -1.84
PDX1P52945 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.56□□□□□ -1.84
PDX1P52945 BRDTP1-201ENST00000605735 677 ntBASIC3.56□□□□□ -1.84
PDX1P52945 RNA5SP108-201ENST00000605921 117 ntBASIC3.56□□□□□ -1.84
PDX1P52945 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.56□□□□□ -1.84
PDX1P52945 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AF246928.1-201ENST00000623768 87 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AC091905.1-201ENST00000624400 311 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AC009039.2-201ENST00000624524 529 ntBASIC3.56□□□□□ -1.84
PDX1P52945 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.56□□□□□ -1.84
PDX1P52945 PCMTD1P7-201ENST00000634506 357 ntBASIC3.56□□□□□ -1.84
PDX1P52945 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PDX1P52945 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDX1P52945 PNPT1P2-201ENST00000456768 2050 ntBASIC3.56□□□□□ -1.84
PDX1P52945 MTND5P3-201ENST00000438536 1800 ntBASIC3.56□□□□□ -1.84
PDX1P52945 NCAPGP1-201ENST00000505112 1814 ntBASIC3.56□□□□□ -1.84
PDX1P52945 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDX1P52945 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
PDX1P52945 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDX1P52945 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDX1P52945 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDX1P52945 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDX1P52945 AC011477.1-204ENST00000623416 1325 ntBASIC3.55□□□□□ -1.84
PDX1P52945 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.55□□□□□ -1.84
PDX1P52945 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PDX1P52945 RNU6-500P-201ENST00000362349 107 ntBASIC3.55□□□□□ -1.84
PDX1P52945 RNA5SP88-201ENST00000365560 109 ntBASIC3.55□□□□□ -1.84
PDX1P52945 HMGN2P8-201ENST00000391458 268 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AL031679.1-201ENST00000400616 525 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AMD1P2-201ENST00000412936 992 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.55□□□□□ -1.84
PDX1P52945 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.55□□□□□ -1.84
PDX1P52945 AC007742.1-201ENST00000425789 329 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AL590233.1-201ENST00000430017 456 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC097713.2-201ENST00000430199 356 ntBASIC3.55□□□□□ -1.84
PDX1P52945 MRPS18BP2-201ENST00000434310 759 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC073063.1-201ENST00000434352 607 ntBASIC3.55□□□□□ -1.84
PDX1P52945 ELOCP26-201ENST00000436067 329 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.55□□□□□ -1.84
PDX1P52945 MTND2P22-201ENST00000444325 1033 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.55□□□□□ -1.84
PDX1P52945 AC002381.1-201ENST00000447049 280 ntBASIC3.55□□□□□ -1.84
PDX1P52945 RPS20P24-201ENST00000457473 361 ntBASIC3.55□□□□□ -1.84
PDX1P52945 SNORD105B-201ENST00000458770 79 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC087312.1-201ENST00000471411 480 ntBASIC3.55□□□□□ -1.84
PDX1P52945 MTND3P7-201ENST00000474435 343 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC072039.1-201ENST00000477611 581 ntBASIC3.55□□□□□ -1.84
PDX1P52945 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.55□□□□□ -1.84
PDX1P52945 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDX1P52945 RPF2P2-201ENST00000504693 896 ntBASIC3.55□□□□□ -1.84
PDX1P52945 MTND1P22-201ENST00000510572 951 ntBASIC3.55□□□□□ -1.84
PDX1P52945 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.55□□□□□ -1.84
PDX1P52945 RNU6-678P-201ENST00000516832 109 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC008802.1-201ENST00000519121 791 ntBASIC3.55□□□□□ -1.84
PDX1P52945 COX6CP8-201ENST00000522620 226 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC022861.1-201ENST00000522981 663 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC087276.1-201ENST00000529659 480 ntBASIC3.55□□□□□ -1.84
PDX1P52945 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.55□□□□□ -1.84
PDX1P52945 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.55□□□□□ -1.84
PDX1P52945 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.55□□□□□ -1.84
PDX1P52945 AC012435.1-202ENST00000568772 240 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC136618.2-201ENST00000575091 400 ntBASIC3.55□□□□□ -1.84
PDX1P52945 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.55□□□□□ -1.84
PDX1P52945 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.55□□□□□ -1.84
PDX1P52945 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.55□□□□□ -1.84
PDX1P52945 AL163642.2-201ENST00000604722 1019 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AL390208.1-201ENST00000605885 644 ntBASIC3.55□□□□□ -1.84
PDX1P52945 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.55□□□□□ -1.84
PDX1P52945 AC091925.2-201ENST00000625059 256 ntBASIC3.55□□□□□ -1.84
PDX1P52945 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC244258.1-201ENST00000637553 1071 ntBASIC3.55□□□□□ -1.84
PDX1P52945 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
PDX1P52945 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.55□□□□□ -1.84
PDX1P52945 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDX1P52945 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
PDX1P52945 AC093010.3-201ENST00000570269 15214 ntBASIC3.55□□□□□ -1.84
PDX1P52945 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.55□□□□□ -1.84
PDX1P52945 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDX1P52945 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.54□□□□□ -1.84
PDX1P52945 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDX1P52945 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms