Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
CXCL12P48061 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.75□□□□□ -1.97
CXCL12P48061 AC079089.3-201ENST00000603094 673 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 AL365503.1-201ENST00000605247 905 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 AC120053.1-201ENST00000607706 736 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 AC025034.2-201ENST00000623264 286 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 AC092184.1-201ENST00000625042 715 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 AL590396.4-201ENST00000636779 956 ntBASIC2.75□□□□□ -1.97
CXCL12P48061 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL12P48061 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.75□□□□□ -1.97
CXCL12P48061 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.75□□□□□ -1.97
CXCL12P48061 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CXCL12P48061 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL12P48061 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.74□□□□□ -1.97
CXCL12P48061 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL12P48061 ASNSP3-201ENST00000451989 1306 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.74□□□□□ -1.97
CXCL12P48061 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CXCL12P48061 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL12P48061 RNU6-1243P-201ENST00000364028 107 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL12P48061 RNU6-207P-201ENST00000384137 107 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 MIR512-1-201ENST00000384913 84 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 RNU6-932P-201ENST00000391108 106 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL12P48061 AL139039.1-201ENST00000401900 692 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.74□□□□□ -1.97
CXCL12P48061 RPL31P2-201ENST00000413849 377 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 MTND2P16-201ENST00000419987 799 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC241520.1-201ENST00000422654 1099 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 OR51AB1P-201ENST00000429046 620 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC010881.1-201ENST00000433830 235 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.74□□□□□ -1.97
CXCL12P48061 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.74□□□□□ -1.97
CXCL12P48061 OR51B8P-201ENST00000449892 769 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.74□□□□□ -1.97
CXCL12P48061 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.74□□□□□ -1.97
CXCL12P48061 CDC42P1-201ENST00000456658 548 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 RPS15AP1-201ENST00000457423 391 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 Y_RNA.638-201ENST00000459374 113 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.74□□□□□ -1.97
CXCL12P48061 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL12P48061 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.74□□□□□ -1.97
CXCL12P48061 MTND4LP22-201ENST00000508209 276 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 RNU5A-7P-201ENST00000515979 116 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 RPL7P20-201ENST00000520308 745 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 HIGD1AP6-201ENST00000521833 279 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AP003102.1-201ENST00000525638 661 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 UBTFL10-201ENST00000528532 562 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC124293.1-201ENST00000530034 493 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AP000873.5-201ENST00000533906 236 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL12P48061 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.74□□□□□ -1.97
CXCL12P48061 TRAV37-201ENST00000553906 342 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC007954.1-201ENST00000554198 494 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL12P48061 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.74□□□□□ -1.97
CXCL12P48061 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL12P48061 NIFKP8-201ENST00000560500 874 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL12P48061 MTCO1P40-201ENST00000574371 625 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.74□□□□□ -1.97
CXCL12P48061 VN1R78P-201ENST00000597393 564 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 MTATP6P2-201ENST00000603319 678 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC013468.1-201ENST00000608680 598 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.74□□□□□ -1.97
CXCL12P48061 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.74□□□□□ -1.97
CXCL12P48061 AL121594.5-201ENST00000631724 573 ntBASIC2.74□□□□□ -1.97
CXCL12P48061 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL12P48061 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL12P48061 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.73□□□□□ -1.97
CXCL12P48061 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CXCL12P48061 AC110774.1-201ENST00000623567 2018 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 AC092593.1-201ENST00000515413 1815 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 ZNF658B-202ENST00000615961 3375 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL12P48061 RNU6-468P-201ENST00000384003 109 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.73□□□□□ -1.97
CXCL12P48061 AC245291.1-201ENST00000419501 328 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.73□□□□□ -1.97
CXCL12P48061 DPPA2P1-201ENST00000428060 556 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 HMGN2P20-201ENST00000437531 273 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.73□□□□□ -1.97
CXCL12P48061 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 snoU13.15-201ENST00000459407 104 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
CXCL12P48061 AC015908.1-201ENST00000478739 476 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 AC006483.1-201ENST00000487308 313 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.73□□□□□ -1.97
CXCL12P48061 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.73□□□□□ -1.97
CXCL12P48061 MTCO3P27-201ENST00000514397 196 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 AP003355.1-201ENST00000518956 587 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 HMGB1P1-201ENST00000522557 636 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
CXCL12P48061 AP003122.3-201ENST00000526316 255 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.73□□□□□ -1.97
CXCL12P48061 OR8L1P-201ENST00000534005 955 ntBASIC2.73□□□□□ -1.97
CXCL12P48061 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.73□□□□□ -1.97
CXCL12P48061 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms