Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX1P47902 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX1P47902 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX1P47902 AC108734.1-201ENST00000439549 399 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AL592447.1-201ENST00000447592 540 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AC104308.1-201ENST00000454621 333 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AC007967.1-201ENST00000455422 1159 ntBASIC3.26□□□□□ -1.89
CDX1P47902 CFTRP1-201ENST00000456646 183 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.26□□□□□ -1.89
CDX1P47902 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.26□□□□□ -1.89
CDX1P47902 UBDP1-202ENST00000457888 382 ntBASIC3.26□□□□□ -1.89
CDX1P47902 OR9M1P-201ENST00000459641 921 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AC010468.1-201ENST00000461022 817 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AC108860.1-201ENST00000484521 383 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AL139099.1-201ENST00000497398 403 ntBASIC3.26□□□□□ -1.89
CDX1P47902 UBE2CP3-201ENST00000502715 450 ntBASIC3.26□□□□□ -1.89
CDX1P47902 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX1P47902 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX1P47902 AC026801.2-201ENST00000515352 425 ntBASIC3.26□□□□□ -1.89
CDX1P47902 RNU6-1129P-201ENST00000515964 104 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AP003497.1-201ENST00000528472 562 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AC013828.2-201ENST00000532487 235 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.26□□□□□ -1.89
CDX1P47902 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.26□□□□□ -1.89
CDX1P47902 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX1P47902 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX1P47902 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX1P47902 AC125611.2-201ENST00000551907 647 ntBASIC3.26□□□□□ -1.89
CDX1P47902 SETP2-201ENST00000553886 926 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX1P47902 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.26□□□□□ -1.89
CDX1P47902 AC012435.1-202ENST00000568772 240 ntBASIC3.26□□□□□ -1.89
CDX1P47902 MIR3160-1-201ENST00000577972 85 ntBASIC3.26□□□□□ -1.89
CDX1P47902 MIR544B-201ENST00000582372 78 ntBASIC3.26□□□□□ -1.89
CDX1P47902 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CDX1P47902 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.26□□□□□ -1.89
CDX1P47902 ELOCP35-201ENST00000604289 336 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AL591034.3-201ENST00000605511 685 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.26□□□□□ -1.89
CDX1P47902 ZYXP1-201ENST00000617638 118 ntBASIC3.26□□□□□ -1.89
CDX1P47902 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CDX1P47902 AL161637.1-201ENST00000622380 412 ntBASIC3.26□□□□□ -1.89
CDX1P47902 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.26□□□□□ -1.89
CDX1P47902 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.26□□□□□ -1.89
CDX1P47902 MIR7153-201ENST00000637758 57 ntBASIC3.26□□□□□ -1.89
CDX1P47902 AC008013.2-202ENST00000637965 364 ntBASIC3.26□□□□□ -1.89
CDX1P47902 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDX1P47902 ZNF826P-207ENST00000622273 1910 ntBASIC3.26□□□□□ -1.89
CDX1P47902 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CDX1P47902 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDX1P47902 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.26□□□□□ -1.89
CDX1P47902 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDX1P47902 AC005832.2-201ENST00000538921 1430 ntBASIC3.26□□□□□ -1.89
CDX1P47902 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDX1P47902 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDX1P47902 AC009812.4-201ENST00000569134 1805 ntBASIC3.26□□□□□ -1.89
CDX1P47902 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDX1P47902 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDX1P47902 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.25□□□□□ -1.89
CDX1P47902 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDX1P47902 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDX1P47902 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDX1P47902 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDX1P47902 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
CDX1P47902 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
CDX1P47902 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX1P47902 U3.20-201ENST00000390909 217 ntBASIC3.25□□□□□ -1.89
CDX1P47902 AC007066.1-201ENST00000392902 381 ntBASIC3.25□□□□□ -1.89
CDX1P47902 PTMAP5-201ENST00000393073 333 ntBASIC3.25□□□□□ -1.89
CDX1P47902 RNA5SP317-201ENST00000410176 116 ntBASIC3.25□□□□□ -1.89
CDX1P47902 RNA5SP311-201ENST00000411290 116 ntBASIC3.25□□□□□ -1.89
CDX1P47902 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDX1P47902 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.25□□□□□ -1.89
CDX1P47902 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX1P47902 RPS15AP6-201ENST00000420703 385 ntBASIC3.25□□□□□ -1.89
CDX1P47902 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX1P47902 MTND4P20-201ENST00000424125 869 ntBASIC3.25□□□□□ -1.89
CDX1P47902 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.25□□□□□ -1.89
CDX1P47902 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.25□□□□□ -1.89
CDX1P47902 AC091862.1-201ENST00000438016 1100 ntBASIC3.25□□□□□ -1.89
CDX1P47902 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.25□□□□□ -1.89
CDX1P47902 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX1P47902 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.25□□□□□ -1.89
CDX1P47902 MTND1P9-201ENST00000453775 944 ntBASIC3.25□□□□□ -1.89
CDX1P47902 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDX1P47902 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.25□□□□□ -1.89
CDX1P47902 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.25□□□□□ -1.89
CDX1P47902 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDX1P47902 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX1P47902 RNA5SP315-201ENST00000516340 116 ntBASIC3.25□□□□□ -1.89
CDX1P47902 RNA5SP312-201ENST00000517068 116 ntBASIC3.25□□□□□ -1.89
CDX1P47902 AC026407.1-201ENST00000518369 204 ntBASIC3.25□□□□□ -1.89
CDX1P47902 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.25□□□□□ -1.89
CDX1P47902 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX1P47902 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX1P47902 AC008489.1-201ENST00000524271 483 ntBASIC3.25□□□□□ -1.89
CDX1P47902 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.25□□□□□ -1.89
CDX1P47902 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.25□□□□□ -1.89
CDX1P47902 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.25□□□□□ -1.89
CDX1P47902 AC008015.1-201ENST00000555505 465 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms