Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MKKS-204ENST00000639674 192 ntBASIC3.59□□□□□ -1.83
NEDD4P46934 AC117529.2-201ENST00000512159 2068 ntBASIC3.59□□□□□ -1.83
NEDD4P46934 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
NEDD4P46934 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NEDD4P46934 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
NEDD4P46934 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NEDD4P46934 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD4P46934 XIAPP3-201ENST00000312918 795 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 MIR22-201ENST00000362190 85 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 MIR422A-201ENST00000362286 90 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 SNORA48.2-201ENST00000390926 124 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 SNORA48.5-201ENST00000391143 135 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 RPL23AP47-201ENST00000408017 460 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 AC069218.2-201ENST00000411665 344 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD4P46934 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD4P46934 MTCO2P21-201ENST00000419780 677 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.58□□□□□ -1.84
NEDD4P46934 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD4P46934 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.58□□□□□ -1.84
NEDD4P46934 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD4P46934 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD4P46934 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.58□□□□□ -1.84
NEDD4P46934 RNF138P1-201ENST00000502765 546 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD4P46934 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD4P46934 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD4P46934 AC009812.2-201ENST00000517657 457 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 PSMA2P1-201ENST00000526365 646 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD4P46934 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD4P46934 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD4P46934 AC009097.3-201ENST00000563557 1018 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 AL132657.2-201ENST00000564417 358 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD4P46934 AL158211.1-201ENST00000566763 763 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD4P46934 MIR4458-201ENST00000578872 75 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD4P46934 HSPE1P14-201ENST00000605812 302 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 AC097478.2-201ENST00000610572 514 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD4P46934 AC011330.2-201ENST00000621680 635 ntBASIC3.58□□□□□ -1.84
NEDD4P46934 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD4P46934 OR5BR1P-201ENST00000524992 1330 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD4P46934 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD4P46934 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NEDD4P46934 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.57□□□□□ -1.84
NEDD4P46934 AC090229.1-201ENST00000590983 1609 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NEDD4P46934 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD4P46934 MIR506-201ENST00000384998 124 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 SSXP10-201ENST00000402595 565 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 AL133384.1-201ENST00000412744 351 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 RPL31P2-201ENST00000413849 377 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 AC004987.3-201ENST00000413879 771 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 AL161449.1-201ENST00000414531 1199 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 USP9YP11-201ENST00000427537 717 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.57□□□□□ -1.84
NEDD4P46934 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.57□□□□□ -1.84
NEDD4P46934 RPL23AP76-201ENST00000441860 458 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.57□□□□□ -1.84
NEDD4P46934 MTCO3P2-201ENST00000457365 171 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.57□□□□□ -1.84
NEDD4P46934 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD4P46934 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.57□□□□□ -1.84
NEDD4P46934 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD4P46934 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.57□□□□□ -1.84
NEDD4P46934 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD4P46934 AC008837.2-201ENST00000513076 418 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 SNORA70.14-201ENST00000516205 110 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.57□□□□□ -1.84
NEDD4P46934 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD4P46934 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD4P46934 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.57□□□□□ -1.84
NEDD4P46934 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD4P46934 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.57□□□□□ -1.84
NEDD4P46934 SULT1C2P1-202ENST00000562418 459 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.57□□□□□ -1.84
NEDD4P46934 SNORD39.3-201ENST00000584451 71 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 AC091057.2-201ENST00000602594 792 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 AC107075.1-201ENST00000613695 314 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 AC140725.3-201ENST00000616193 880 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.57□□□□□ -1.84
NEDD4P46934 AP000676.4-201ENST00000624659 623 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 MIR4496-201ENST00000635896 61 ntBASIC3.57□□□□□ -1.84
NEDD4P46934 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
NEDD4P46934 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD4P46934 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.56□□□□□ -1.84
NEDD4P46934 SEPT7P7-201ENST00000420492 1301 ntBASIC3.56□□□□□ -1.84
NEDD4P46934 AC107982.1-201ENST00000507171 1300 ntBASIC3.56□□□□□ -1.84
NEDD4P46934 AC109315.1-201ENST00000584143 1347 ntBASIC3.56□□□□□ -1.84
NEDD4P46934 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEDD4P46934 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEDD4P46934 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NEDD4P46934 Y_RNA.25-201ENST00000362528 102 ntBASIC3.56□□□□□ -1.84
NEDD4P46934 MIR483-201ENST00000385070 76 ntBASIC3.56□□□□□ -1.84
NEDD4P46934 AC073264.1-201ENST00000411508 416 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms