Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD13P35453 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HOXD13P35453 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD13P35453 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXD13P35453 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD13P35453 RNU6-97P-201ENST00000363387 104 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 Y_RNA.234-201ENST00000364409 97 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 RPS3AP26-201ENST00000398259 784 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXD13P35453 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD13P35453 AC010099.3-201ENST00000423896 409 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 MTCO1P39-201ENST00000426148 480 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AC017083.1-201ENST00000428093 483 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 TXNL1P1-201ENST00000429528 554 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AC018644.1-201ENST00000429934 551 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXD13P35453 YWHAZP7-201ENST00000436906 631 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AL354941.1-201ENST00000438600 464 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXD13P35453 U3.44-201ENST00000458938 192 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 RNU7-170P-201ENST00000459303 61 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD13P35453 VN1R104P-201ENST00000505115 1009 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXD13P35453 AC105914.1-201ENST00000511798 226 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 RNU1-61P-201ENST00000516107 151 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 SNORA70.14-201ENST00000516205 110 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD13P35453 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD13P35453 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXD13P35453 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.89□□□□□ -1.79
HOXD13P35453 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXD13P35453 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXD13P35453 MIR3922-201ENST00000585192 84 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AL022099.1-201ENST00000604551 712 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AL133507.1-201ENST00000605269 557 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AC063944.3-201ENST00000609969 533 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AC106028.5-201ENST00000610332 395 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AL590099.1-201ENST00000615276 138 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 U4.6-201ENST00000621618 127 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AL353748.2-201ENST00000622148 471 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AC095031.1-201ENST00000623685 672 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 AC007490.1-201ENST00000624321 703 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXD13P35453 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD13P35453 OTUD4P1-201ENST00000237841 3067 ntBASIC3.89□□□□□ -1.79
HOXD13P35453 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD13P35453 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD13P35453 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HOXD13P35453 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HOXD13P35453 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HOXD13P35453 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD13P35453 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD13P35453 AC087359.1-201ENST00000508335 1740 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HOXD13P35453 RNU6-1214P-201ENST00000363650 109 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 RNU6-359P-201ENST00000365466 108 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD13P35453 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HOXD13P35453 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD13P35453 AC009237.5-201ENST00000414271 501 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD13P35453 AC079780.1-201ENST00000428259 207 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD13P35453 CDC27P1-201ENST00000445384 715 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 AL133547.1-201ENST00000448546 220 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD13P35453 ANP32BP2-201ENST00000454525 545 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD13P35453 AL109741.2-201ENST00000455561 343 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD13P35453 RPL7L1P8-201ENST00000469911 741 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 AC106707.2-201ENST00000484182 374 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD13P35453 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD13P35453 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD13P35453 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD13P35453 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXD13P35453 SAP18P1-201ENST00000512058 390 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 AC023632.4-201ENST00000517783 191 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXD13P35453 MTCO1P49-201ENST00000523429 802 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD13P35453 UBE2NP1-201ENST00000545592 458 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 SYF2P1-201ENST00000550658 413 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXD13P35453 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD13P35453 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HOXD13P35453 AC022149.2-201ENST00000621061 203 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 AL356863.1-201ENST00000623378 1080 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 AC009039.2-201ENST00000624524 529 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXD13P35453 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
HOXD13P35453 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXD13P35453 PRO1804-201ENST00000623780 2050 ntBASIC3.88□□□□□ -1.79
HOXD13P35453 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HOXD13P35453 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HOXD13P35453 TAB3P1-202ENST00000452645 1634 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms