Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC124312.4-201ENST00000605533 310 ntBASIC3.87□□□□□ -1.79
HOXC8P31273 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC8P31273 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HOXC8P31273 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC8P31273 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC8P31273 AC007656.2-201ENST00000624902 4547 ntBASIC3.87□□□□□ -1.79
HOXC8P31273 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC8P31273 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC8P31273 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC8P31273 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC8P31273 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC8P31273 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXC8P31273 FRG1CP-201ENST00000358464 769 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 RNU5D-1-201ENST00000363299 116 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXC8P31273 SNORD116-1-201ENST00000384335 95 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 RNU6-878P-201ENST00000384578 110 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 NDUFB4P4-201ENST00000404822 243 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AL138878.1-201ENST00000405131 347 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 RNU2-71P-201ENST00000411395 189 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 Z92545.1-201ENST00000411782 234 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC8P31273 RAD23BP2-201ENST00000416003 1207 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AC004552.1-201ENST00000419089 348 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AL139421.1-201ENST00000423010 169 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC8P31273 AL593851.1-201ENST00000426171 157 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AL353748.1-201ENST00000440753 474 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 ANP32BP2-201ENST00000454525 545 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 RPS26P3-201ENST00000470205 348 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC8P31273 AC090543.2-201ENST00000483963 348 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AC004057.1-201ENST00000485827 348 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 RPS26P15-201ENST00000488067 348 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC8P31273 AC004069.2-201ENST00000505438 1114 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXC8P31273 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC8P31273 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
HOXC8P31273 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC8P31273 AC008489.1-201ENST00000524271 483 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AC135279.1-201ENST00000543493 504 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 ELOCP32-201ENST00000548625 324 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC8P31273 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC8P31273 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC8P31273 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC8P31273 AC012493.2-201ENST00000595083 291 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC8P31273 RPL23AP92-201ENST00000603609 255 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AC121247.2-201ENST00000604776 136 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AL590282.1-201ENST00000610379 1136 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AL603755.1-201ENST00000619504 163 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 AC040168.1-201ENST00000623594 991 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC8P31273 AC007671.2-201ENST00000637344 619 ntBASIC3.86□□□□□ -1.79
HOXC8P31273 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC8P31273 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
HOXC8P31273 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC8P31273 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC8P31273 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC8P31273 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC8P31273 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC8P31273 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC8P31273 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC8P31273 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
HOXC8P31273 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC8P31273 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HOXC8P31273 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC8P31273 AP000776.1-201ENST00000530032 1663 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HOXC8P31273 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC8P31273 RNA5SP80-201ENST00000410475 111 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXC8P31273 AL161449.1-201ENST00000414531 1199 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 LUZP4P1-201ENST00000415420 344 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC8P31273 AC234781.2-201ENST00000426370 994 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 USP9YP31-201ENST00000431405 881 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 VDAC1P3-201ENST00000434069 851 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC8P31273 RFC5P1-201ENST00000454419 874 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.85□□□□□ -1.79
HOXC8P31273 AC087312.1-201ENST00000471411 480 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 RPS29P2-201ENST00000479278 136 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC8P31273 RPF2P2-201ENST00000504693 896 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 AC139783.2-201ENST00000504847 1145 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC8P31273 IGKV2D-23-201ENST00000518179 286 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC8P31273 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC8P31273 AP006245.1-201ENST00000522549 120 ntBASIC3.85□□□□□ -1.79
HOXC8P31273 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC8P31273 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC8P31273 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXC8P31273 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXC8P31273 AC011611.1-201ENST00000552179 197 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms