Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPRMP28827 AL589994.2-201ENST00000621124 579 ntBASIC3.12□□□□□ -1.91
PTPRMP28827 MIR6715B-201ENST00000637172 77 ntBASIC3.12□□□□□ -1.91
PTPRMP28827 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRMP28827 SNORA40.18-201ENST00000391200 128 ntBASIC3.11□□□□□ -1.91
PTPRMP28827 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.11□□□□□ -1.91
PTPRMP28827 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRMP28827 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPRMP28827 RNA5SP182-201ENST00000516064 82 ntBASIC3.11□□□□□ -1.91
PTPRMP28827 DNAJC19P9-201ENST00000555084 351 ntBASIC3.11□□□□□ -1.91
PTPRMP28827 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPRMP28827 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRMP28827 AC023043.3-201ENST00000593113 385 ntBASIC3.11□□□□□ -1.91
PTPRMP28827 VN1R79P-201ENST00000593540 513 ntBASIC3.11□□□□□ -1.91
PTPRMP28827 BX248123.2-201ENST00000606318 124 ntBASIC3.11□□□□□ -1.91
PTPRMP28827 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRMP28827 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPRMP28827 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PTPRMP28827 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
PTPRMP28827 MIR365B-201ENST00000362317 111 ntBASIC3.1□□□□□ -1.91
PTPRMP28827 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPRMP28827 RNU6-178P-201ENST00000384631 104 ntBASIC3.1□□□□□ -1.91
PTPRMP28827 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.1□□□□□ -1.91
PTPRMP28827 AC009237.8-201ENST00000445492 379 ntBASIC3.1□□□□□ -1.91
PTPRMP28827 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.1□□□□□ -1.91
PTPRMP28827 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPRMP28827 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPRMP28827 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.1□□□□□ -1.91
PTPRMP28827 AL160237.3-201ENST00000604114 1013 ntBASIC3.1□□□□□ -1.91
PTPRMP28827 AL451074.6-201ENST00000608512 729 ntBASIC3.1□□□□□ -1.91
PTPRMP28827 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPRMP28827 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPRMP28827 AC010872.1-201ENST00000624225 675 ntBASIC3.1□□□□□ -1.91
PTPRMP28827 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPRMP28827 SNORD114-26-201ENST00000363543 72 ntBASIC3.09□□□□□ -1.91
PTPRMP28827 RNU2-68P-201ENST00000410878 191 ntBASIC3.09□□□□□ -1.91
PTPRMP28827 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.09□□□□□ -1.91
PTPRMP28827 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPRMP28827 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPRMP28827 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.09□□□□□ -1.91
PTPRMP28827 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.09□□□□□ -1.91
PTPRMP28827 RPL23AP63-201ENST00000498752 471 ntBASIC3.09□□□□□ -1.91
PTPRMP28827 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPRMP28827 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPRMP28827 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
PTPRMP28827 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPRMP28827 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPRMP28827 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPRMP28827 RN7SKP44-201ENST00000363602 316 ntBASIC3.09□□□□□ -1.92
PTPRMP28827 U8.8-201ENST00000365399 135 ntBASIC3.09□□□□□ -1.92
PTPRMP28827 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.09□□□□□ -1.92
PTPRMP28827 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
PTPRMP28827 AC104332.2-201ENST00000429959 156 ntBASIC3.09□□□□□ -1.92
PTPRMP28827 FABP5P13-201ENST00000452144 328 ntBASIC3.09□□□□□ -1.92
PTPRMP28827 AL121594.1-201ENST00000475906 575 ntBASIC3.09□□□□□ -1.92
PTPRMP28827 AC098583.1-201ENST00000480875 255 ntBASIC3.09□□□□□ -1.92
PTPRMP28827 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.09□□□□□ -1.92
PTPRMP28827 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.09□□□□□ -1.92
PTPRMP28827 RN7SKP40-201ENST00000517211 242 ntBASIC3.09□□□□□ -1.92
PTPRMP28827 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.09□□□□□ -1.92
PTPRMP28827 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
PTPRMP28827 AC093591.3-201ENST00000634516 308 ntBASIC3.09□□□□□ -1.92
PTPRMP28827 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTPRMP28827 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PTPRMP28827 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPRMP28827 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTPRMP28827 AL161431.1-201ENST00000618966 4205 ntBASIC3.08□□□□□ -1.92
PTPRMP28827 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTPRMP28827 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPRMP28827 AL021407.1-201ENST00000404531 386 ntBASIC3.08□□□□□ -1.92
PTPRMP28827 AL354719.1-201ENST00000406535 843 ntBASIC3.08□□□□□ -1.92
PTPRMP28827 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.08□□□□□ -1.92
PTPRMP28827 VTA1P2-201ENST00000520205 911 ntBASIC3.08□□□□□ -1.92
PTPRMP28827 RPS3AP4-201ENST00000555161 764 ntBASIC3.08□□□□□ -1.92
PTPRMP28827 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPRMP28827 AL354943.1-201ENST00000572103 781 ntBASIC3.08□□□□□ -1.92
PTPRMP28827 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPRMP28827 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPRMP28827 SNORA25.6-201ENST00000364121 118 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 RNU1-57P-201ENST00000384491 166 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 SSR1P1-201ENST00000407630 814 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 RN7SKP123-201ENST00000410732 291 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPRMP28827 RPL23AP58-201ENST00000440453 469 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 RPS7P5-201ENST00000441482 581 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPRMP28827 Z73417.1-201ENST00000447373 778 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPRMP28827 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPRMP28827 AC117532.1-201ENST00000514638 323 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 AC090819.1-201ENST00000523800 1111 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPRMP28827 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPRMP28827 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.07□□□□□ -1.92
PTPRMP28827 MIR4303-201ENST00000581299 66 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.07□□□□□ -1.92
PTPRMP28827 WISP1-OT1-201ENST00000602893 642 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 RPAP2P1-201ENST00000603626 1168 ntBASIC3.07□□□□□ -1.92
PTPRMP28827 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms