Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 SNORD82-201ENST00000365530 70 ntBASIC5.29□□□□□ -1.56
NID1P14543 RNU6-1081P-201ENST00000384537 107 ntBASIC5.29□□□□□ -1.56
NID1P14543 MIR130A-201ENST00000385274 89 ntBASIC5.29□□□□□ -1.56
NID1P14543 HMGB3P7-201ENST00000400214 611 ntBASIC5.29□□□□□ -1.56
NID1P14543 RNU2-25P-201ENST00000411041 191 ntBASIC5.29□□□□□ -1.56
NID1P14543 RNA5SP111-201ENST00000411386 101 ntBASIC5.29□□□□□ -1.56
NID1P14543 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.29□□□□□ -1.56
NID1P14543 AL451074.5-201ENST00000415894 435 ntBASIC5.29□□□□□ -1.56
NID1P14543 AL354868.1-201ENST00000417077 482 ntBASIC5.29□□□□□ -1.56
NID1P14543 BX276092.3-201ENST00000424182 230 ntBASIC5.29□□□□□ -1.56
NID1P14543 UBE2V1P4-201ENST00000425374 344 ntBASIC5.29□□□□□ -1.56
NID1P14543 DNAJC19P7-201ENST00000428811 344 ntBASIC5.29□□□□□ -1.56
NID1P14543 AC126120.1-201ENST00000431082 470 ntBASIC5.29□□□□□ -1.56
NID1P14543 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.29□□□□□ -1.56
NID1P14543 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.29□□□□□ -1.56
NID1P14543 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.29□□□□□ -1.56
NID1P14543 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
NID1P14543 RPS26P39-201ENST00000469206 341 ntBASIC5.29□□□□□ -1.56
NID1P14543 AC087385.1-201ENST00000475062 312 ntBASIC5.29□□□□□ -1.56
NID1P14543 RN7SL629P-201ENST00000489622 285 ntBASIC5.29□□□□□ -1.56
NID1P14543 AC005912.1-201ENST00000495392 255 ntBASIC5.29□□□□□ -1.56
NID1P14543 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NID1P14543 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.29□□□□□ -1.56
NID1P14543 AC012339.2-201ENST00000523996 453 ntBASIC5.29□□□□□ -1.56
NID1P14543 HMGN2P36-201ENST00000529541 409 ntBASIC5.29□□□□□ -1.56
NID1P14543 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.29□□□□□ -1.56
NID1P14543 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.29□□□□□ -1.56
NID1P14543 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.29□□□□□ -1.56
NID1P14543 AP002770.2-201ENST00000543613 532 ntBASIC5.29□□□□□ -1.56
NID1P14543 AC010620.2-201ENST00000600135 313 ntBASIC5.29□□□□□ -1.56
NID1P14543 AL022394.1-201ENST00000606979 292 ntBASIC5.29□□□□□ -1.56
NID1P14543 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.29□□□□□ -1.56
NID1P14543 AL049767.1-202ENST00000637826 242 ntBASIC5.29□□□□□ -1.56
NID1P14543 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NID1P14543 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NID1P14543 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.29□□□□□ -1.56
NID1P14543 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NID1P14543 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NID1P14543 EIF2AP4-201ENST00000424793 1781 ntBASIC5.29□□□□□ -1.56
NID1P14543 AC114774.1-201ENST00000507410 1770 ntBASIC5.29□□□□□ -1.56
NID1P14543 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NID1P14543 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NID1P14543 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NID1P14543 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.28□□□□□ -1.56
NID1P14543 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
NID1P14543 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
NID1P14543 Y_RNA.65-201ENST00000362846 100 ntBASIC5.28□□□□□ -1.56
NID1P14543 Y_RNA.200-201ENST00000364018 102 ntBASIC5.28□□□□□ -1.56
NID1P14543 RNU6-1078P-201ENST00000364522 103 ntBASIC5.28□□□□□ -1.56
NID1P14543 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NID1P14543 RNU6-946P-201ENST00000383878 107 ntBASIC5.28□□□□□ -1.56
NID1P14543 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NID1P14543 RNA5SP36-201ENST00000410197 133 ntBASIC5.28□□□□□ -1.56
NID1P14543 Y_RNA.793-201ENST00000411222 111 ntBASIC5.28□□□□□ -1.56
NID1P14543 MRPL53P1-201ENST00000414323 319 ntBASIC5.28□□□□□ -1.56
NID1P14543 AL035660.1-201ENST00000422041 222 ntBASIC5.28□□□□□ -1.56
NID1P14543 AC234779.1-201ENST00000425910 285 ntBASIC5.28□□□□□ -1.56
NID1P14543 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 RPS3AP46-201ENST00000448352 682 ntBASIC5.28□□□□□ -1.56
NID1P14543 AL353691.1-201ENST00000451332 387 ntBASIC5.28□□□□□ -1.56
NID1P14543 RNU7-187P-201ENST00000458985 68 ntBASIC5.28□□□□□ -1.56
NID1P14543 RN7SL717P-201ENST00000478343 297 ntBASIC5.28□□□□□ -1.56
NID1P14543 AC069499.1-201ENST00000489433 509 ntBASIC5.28□□□□□ -1.56
NID1P14543 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 AC139365.2-201ENST00000517972 253 ntBASIC5.28□□□□□ -1.56
NID1P14543 AC096996.1-201ENST00000563813 325 ntBASIC5.28□□□□□ -1.56
NID1P14543 MIR4489-201ENST00000578869 62 ntBASIC5.28□□□□□ -1.56
NID1P14543 SNORD95-201ENST00000579879 68 ntBASIC5.28□□□□□ -1.56
NID1P14543 COX6CP7-201ENST00000597056 208 ntBASIC5.28□□□□□ -1.56
NID1P14543 RPS29P30-201ENST00000600975 111 ntBASIC5.28□□□□□ -1.56
NID1P14543 AL670379.6-201ENST00000603753 252 ntBASIC5.28□□□□□ -1.56
NID1P14543 AL670379.1-201ENST00000604752 252 ntBASIC5.28□□□□□ -1.56
NID1P14543 AL670379.5-201ENST00000605253 252 ntBASIC5.28□□□□□ -1.56
NID1P14543 AL670379.8-201ENST00000605353 252 ntBASIC5.28□□□□□ -1.56
NID1P14543 AL670379.7-201ENST00000605823 252 ntBASIC5.28□□□□□ -1.56
NID1P14543 AP001282.2-201ENST00000616149 309 ntBASIC5.28□□□□□ -1.56
NID1P14543 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.28□□□□□ -1.56
NID1P14543 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.28□□□□□ -1.56
NID1P14543 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.28□□□□□ -1.56
NID1P14543 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.28□□□□□ -1.56
NID1P14543 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NID1P14543 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NID1P14543 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.27□□□□□ -1.57
NID1P14543 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
NID1P14543 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.27□□□□□ -1.57
NID1P14543 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NID1P14543 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NID1P14543 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NID1P14543 AL121839.2-201ENST00000565058 6943 ntBASIC5.27□□□□□ -1.57
NID1P14543 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms