Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
COL11A2P13942 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL11A2P13942 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.51□□□□□ -1.69
COL11A2P13942 RNU6-619P-201ENST00000365146 108 ntBASIC4.51□□□□□ -1.69
COL11A2P13942 RNU6-452P-201ENST00000384406 107 ntBASIC4.51□□□□□ -1.69
COL11A2P13942 RNU6-248P-201ENST00000410720 107 ntBASIC4.51□□□□□ -1.69
COL11A2P13942 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
COL11A2P13942 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.51□□□□□ -1.69
COL11A2P13942 RPL37P3-201ENST00000456825 293 ntBASIC4.51□□□□□ -1.69
COL11A2P13942 NF1P3-201ENST00000457709 450 ntBASIC4.51□□□□□ -1.69
COL11A2P13942 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.51□□□□□ -1.69
COL11A2P13942 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
COL11A2P13942 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.51□□□□□ -1.69
COL11A2P13942 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.51□□□□□ -1.69
COL11A2P13942 AP001893.2-201ENST00000526949 202 ntBASIC4.51□□□□□ -1.69
COL11A2P13942 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.51□□□□□ -1.69
COL11A2P13942 AC024224.1-201ENST00000538284 609 ntBASIC4.51□□□□□ -1.69
COL11A2P13942 AL390334.1-201ENST00000556395 450 ntBASIC4.51□□□□□ -1.69
COL11A2P13942 MIR5186-201ENST00000577504 120 ntBASIC4.51□□□□□ -1.69
COL11A2P13942 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.51□□□□□ -1.69
COL11A2P13942 MKKS-204ENST00000639674 192 ntBASIC4.51□□□□□ -1.69
COL11A2P13942 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL11A2P13942 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL11A2P13942 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL11A2P13942 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
COL11A2P13942 MAPK10-253ENST00000641010 4072 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.5□□□□□ -1.69
COL11A2P13942 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
COL11A2P13942 AL031985.3-201ENST00000565390 2449 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 TMSB4XP8-201ENST00000402089 135 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.5□□□□□ -1.69
COL11A2P13942 OR51A3P-201ENST00000413596 924 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 TMSB4XP6-201ENST00000415187 135 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 RPL21P111-201ENST00000418453 477 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 USP9YP20-201ENST00000419224 558 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.5□□□□□ -1.69
COL11A2P13942 TMSB4XP1-201ENST00000424567 135 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 ATP5HP2-201ENST00000433885 485 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 RPL37P21-201ENST00000435890 276 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 AC104850.1-201ENST00000435940 476 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.5□□□□□ -1.69
COL11A2P13942 AC005008.1-201ENST00000456151 612 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 RN7SL271P-201ENST00000487601 295 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 AC108078.1-201ENST00000508073 725 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 MTCO1P30-201ENST00000515244 580 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 FAM92A1P1-201ENST00000528023 890 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 OR4A45P-201ENST00000529954 901 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.5□□□□□ -1.69
COL11A2P13942 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.5□□□□□ -1.69
COL11A2P13942 HMGB1P33-201ENST00000563485 527 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 AC233702.9-201ENST00000581528 203 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 AC018690.1-201ENST00000608144 626 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 AL020991.1-201ENST00000612314 373 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 MIR7112-201ENST00000616126 65 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 AC108479.2-201ENST00000617314 601 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 AC136475.10-201ENST00000620253 385 ntBASIC4.5□□□□□ -1.69
COL11A2P13942 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.5□□□□□ -1.69
COL11A2P13942 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A2P13942 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
COL11A2P13942 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.5□□□□□ -1.69
COL11A2P13942 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A2P13942 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A2P13942 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.5□□□□□ -1.69
COL11A2P13942 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A2P13942 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A2P13942 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A2P13942 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
COL11A2P13942 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.5□□□□□ -1.69
COL11A2P13942 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A2P13942 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A2P13942 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 RNA5SP374-201ENST00000362939 125 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 Y_RNA.295-201ENST00000364918 102 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 RNU5E-5P-201ENST00000365379 116 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC109780.2-201ENST00000413467 845 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 USP9YP13-201ENST00000417797 480 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 USP9YP27-201ENST00000418455 438 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A2P13942 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A2P13942 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.49□□□□□ -1.69
COL11A2P13942 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A2P13942 AP001486.1-201ENST00000463339 476 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.49□□□□□ -1.69
COL11A2P13942 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.49□□□□□ -1.69
COL11A2P13942 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A2P13942 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.49□□□□□ -1.69
COL11A2P13942 MTCYBP17-201ENST00000503579 789 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 MTCO3P9-201ENST00000506989 781 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A2P13942 MTND5P4-201ENST00000514978 288 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 RNU6-1153P-201ENST00000516760 105 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 DEFB131D-201ENST00000526803 184 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A2P13942 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.49□□□□□ -1.69
COL11A2P13942 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.49□□□□□ -1.69
COL11A2P13942 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A2P13942 AL161729.4-201ENST00000604650 476 ntBASIC4.49□□□□□ -1.69
COL11A2P13942 AC010200.2-201ENST00000605098 235 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms