Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU6-809P-201ENST00000384461 107 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SNRPA1P09661 Y_RNA.598-201ENST00000410480 95 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 RNA5SP146-201ENST00000410743 123 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.85□□□□□ -1.63
SNRPA1P09661 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNRPA1P09661 HSPD1P21-201ENST00000436541 245 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 SNORA71B-202ENST00000439232 272 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 AC098824.1-201ENST00000453565 980 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 HMGN3P1-201ENST00000453847 193 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 SNRPFP4-201ENST00000456366 242 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 RPL7P49-201ENST00000471402 708 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.85□□□□□ -1.63
SNRPA1P09661 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.85□□□□□ -1.63
SNRPA1P09661 AC093809.1-201ENST00000509155 340 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 NDUFB4P2-201ENST00000509515 391 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 RAC1P2-201ENST00000511164 579 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.85□□□□□ -1.63
SNRPA1P09661 RN7SKP18-201ENST00000516005 275 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SNRPA1P09661 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.85□□□□□ -1.63
SNRPA1P09661 MTND4LP18-201ENST00000526864 291 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.85□□□□□ -1.63
SNRPA1P09661 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.85□□□□□ -1.63
SNRPA1P09661 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.85□□□□□ -1.63
SNRPA1P09661 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNRPA1P09661 AC079684.1-201ENST00000621405 437 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNRPA1P09661 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SNRPA1P09661 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.85□□□□□ -1.63
SNRPA1P09661 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNRPA1P09661 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNRPA1P09661 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNRPA1P09661 AP001273.1-201ENST00000624493 3152 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNRPA1P09661 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.84□□□□□ -1.63
SNRPA1P09661 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNRPA1P09661 AL592437.2-201ENST00000421655 2434 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AL049555.1-201ENST00000562834 1933 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 ELF2P3-201ENST00000445099 1506 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 RNU6-289P-201ENST00000364093 107 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 RPL17P50-201ENST00000396131 546 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.84□□□□□ -1.63
SNRPA1P09661 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.84□□□□□ -1.63
SNRPA1P09661 RPS29P4-201ENST00000414733 161 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.84□□□□□ -1.63
SNRPA1P09661 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.84□□□□□ -1.63
SNRPA1P09661 MTND1P2-201ENST00000430604 821 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.84□□□□□ -1.63
SNRPA1P09661 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.84□□□□□ -1.63
SNRPA1P09661 MTCO1P27-201ENST00000448269 226 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.84□□□□□ -1.63
SNRPA1P09661 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.84□□□□□ -1.63
SNRPA1P09661 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.84□□□□□ -1.63
SNRPA1P09661 AC006511.1-201ENST00000470614 315 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC010301.1-201ENST00000473936 355 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC105252.1-201ENST00000503089 286 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.84□□□□□ -1.63
SNRPA1P09661 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.84□□□□□ -1.63
SNRPA1P09661 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.84□□□□□ -1.63
SNRPA1P09661 SOD1P3-201ENST00000518682 454 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNRPA1P09661 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.84□□□□□ -1.63
SNRPA1P09661 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.84□□□□□ -1.63
SNRPA1P09661 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.84□□□□□ -1.63
SNRPA1P09661 RPS3AP4-201ENST00000555161 764 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC137800.2-201ENST00000574375 120 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 MIR544B-201ENST00000582372 78 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.84□□□□□ -1.63
SNRPA1P09661 AC112187.2-201ENST00000604345 283 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AL022154.1-201ENST00000604698 785 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC084757.4-201ENST00000616350 526 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC104010.1-201ENST00000616889 150 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC012314.7-201ENST00000619693 93 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC015967.1-201ENST00000619893 476 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AC138649.3-201ENST00000622154 254 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 AL157786.1-207ENST00000627771 695 ntBASIC4.84□□□□□ -1.63
SNRPA1P09661 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNRPA1P09661 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNRPA1P09661 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
SNRPA1P09661 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SNRPA1P09661 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.84□□□□□ -1.64
SNRPA1P09661 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.84□□□□□ -1.64
SNRPA1P09661 AC107081.3-201ENST00000612715 2034 ntBASIC4.84□□□□□ -1.64
SNRPA1P09661 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SNRPA1P09661 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SNRPA1P09661 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNRPA1P09661 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNRPA1P09661 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SNRPA1P09661 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.83□□□□□ -1.64
SNRPA1P09661 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.83□□□□□ -1.64
SNRPA1P09661 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SNRPA1P09661 RNU5E-4P-201ENST00000364931 120 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNRPA1P09661 RNU6-921P-201ENST00000384361 107 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNRPA1P09661 MIR320C1-201ENST00000408566 88 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 ATP5A1P2-201ENST00000412323 255 ntBASIC4.83□□□□□ -1.64
SNRPA1P09661 AC068533.1-201ENST00000418542 415 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms