Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB1P09429 MIR4284-201ENST00000578924 81 ntBASIC4.92□□□□□ -1.62
HMGB1P09429 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGB1P09429 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB1P09429 AC114781.5-201ENST00000615297 108 ntBASIC4.92□□□□□ -1.62
HMGB1P09429 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGB1P09429 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGB1P09429 AP000676.3-201ENST00000623299 569 ntBASIC4.92□□□□□ -1.62
HMGB1P09429 MIR3653-201ENST00000625572 110 ntBASIC4.92□□□□□ -1.62
HMGB1P09429 MIR7641-1-201ENST00000627518 61 ntBASIC4.92□□□□□ -1.62
HMGB1P09429 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HMGB1P09429 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HMGB1P09429 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.92□□□□□ -1.62
HMGB1P09429 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB1P09429 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB1P09429 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGB1P09429 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB1P09429 ATP5F1P3-201ENST00000397213 657 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 RN7SKP140-201ENST00000411196 284 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB1P09429 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGB1P09429 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGB1P09429 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGB1P09429 COX6B1P7-201ENST00000430845 235 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB1P09429 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.91□□□□□ -1.62
HMGB1P09429 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB1P09429 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB1P09429 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB1P09429 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB1P09429 AP002748.2-201ENST00000528671 348 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB1P09429 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGB1P09429 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.91□□□□□ -1.62
HMGB1P09429 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB1P09429 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGB1P09429 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB1P09429 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.91□□□□□ -1.62
HMGB1P09429 AC002545.1-201ENST00000592511 181 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 AP000811.1-201ENST00000603803 651 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 AC091965.4-201ENST00000607691 587 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 AC107214.2-201ENST00000608204 634 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HMGB1P09429 AC093838.1-201ENST00000613014 469 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 AC013476.2-201ENST00000614456 459 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 SDR42E1P2-201ENST00000614861 481 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 AC011944.2-201ENST00000624440 683 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGB1P09429 MTND5P33-201ENST00000571250 1450 ntBASIC4.91□□□□□ -1.62
HMGB1P09429 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
HMGB1P09429 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HMGB1P09429 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HMGB1P09429 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.91□□□□□ -1.62
HMGB1P09429 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HMGB1P09429 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGB1P09429 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB1P09429 AL391994.1-201ENST00000254724 282 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 RHOT1P2-201ENST00000366423 333 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HMGB1P09429 RNU6-769P-201ENST00000384407 104 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 MIR93-201ENST00000385024 80 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 CCNG1P1-201ENST00000406783 885 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGB1P09429 FTH1P1-201ENST00000437933 532 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 RPL7P36-201ENST00000444633 681 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 MTCO3P16-201ENST00000454456 754 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB1P09429 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGB1P09429 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB1P09429 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGB1P09429 RNU6-420P-201ENST00000458780 107 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 UQCRHP4-201ENST00000471686 272 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 AC108475.1-201ENST00000507880 950 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.9□□□□□ -1.63
HMGB1P09429 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGB1P09429 AC022655.2-201ENST00000577280 318 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGB1P09429 NUTF2P8-201ENST00000604593 363 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 AC093424.1-201ENST00000604999 338 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 MIR8059-201ENST00000620427 81 ntBASIC4.9□□□□□ -1.63
HMGB1P09429 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB1P09429 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB1P09429 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGB1P09429 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGB1P09429 AC007785.2-201ENST00000598627 1916 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 AC104454.1-201ENST00000421341 1401 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 AC110774.1-201ENST00000623567 2018 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB1P09429 MIR383-201ENST00000362257 73 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGB1P09429 SNORA37-201ENST00000384504 129 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 MIR513A2-201ENST00000385249 127 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 AC110754.1-201ENST00000399740 601 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 AL109755.1-201ENST00000401791 649 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.89□□□□□ -1.63
HMGB1P09429 AC012498.1-201ENST00000424037 437 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGB1P09429 RPL18P10-201ENST00000425606 538 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 RPL23AP82-202ENST00000427528 469 ntBASIC4.89□□□□□ -1.63
HMGB1P09429 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms