Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC022022.2-201ENST00000602989 360 ntBASIC3.03□□□□□ -1.92
HOXC4P09017 BNIP3P11-201ENST00000603878 563 ntBASIC3.03□□□□□ -1.92
HOXC4P09017 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXC4P09017 AC006023.2-201ENST00000609916 167 ntBASIC3.03□□□□□ -1.92
HOXC4P09017 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXC4P09017 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXC4P09017 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXC4P09017 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXC4P09017 FAM35BP-202ENST00000497389 3337 ntBASIC3.03□□□□□ -1.93
HOXC4P09017 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.03□□□□□ -1.93
HOXC4P09017 AC000403.1-201ENST00000613696 3585 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC4P09017 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HOXC4P09017 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HOXC4P09017 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXC4P09017 GNG5P1-201ENST00000255500 204 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HOXC4P09017 RNU6-600P-201ENST00000362524 99 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 U3.11-201ENST00000364476 212 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HOXC4P09017 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HOXC4P09017 SNORA44-201ENST00000384584 132 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HOXC4P09017 AC110754.1-201ENST00000399740 601 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 MTND4P13-201ENST00000402078 1023 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 SSXP10-201ENST00000402595 565 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC4P09017 AP000567.1-201ENST00000406413 156 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 RNU4-22P-201ENST00000411058 166 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 RNA5SP107-201ENST00000411358 122 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXC4P09017 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.02□□□□□ -1.93
HOXC4P09017 RPL7P44-201ENST00000424827 742 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 HMGB1P12-201ENST00000438594 598 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 AC092155.2-201ENST00000454675 477 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 SNORD11.1-201ENST00000459482 85 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 RPL21P104-201ENST00000464143 478 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 VN1R17P-201ENST00000472048 1090 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 SYPL1P1-201ENST00000473622 768 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 RPL7P23-201ENST00000493874 747 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 OR2A20P-203ENST00000498397 1268 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC4P09017 AC114967.1-201ENST00000504890 259 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 MTND4LP22-201ENST00000508209 276 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 RNU6-311P-201ENST00000516224 102 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC4P09017 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HOXC4P09017 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.02□□□□□ -1.93
HOXC4P09017 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC4P09017 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXC4P09017 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC4P09017 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXC4P09017 AL513477.2-201ENST00000607858 568 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 Z99129.2-201ENST00000619967 314 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 AC009039.2-201ENST00000624524 529 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 MTND2P41-201ENST00000637599 773 ntBASIC3.02□□□□□ -1.93
HOXC4P09017 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC4P09017 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXC4P09017 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC4P09017 MTCO1P6-201ENST00000481192 1384 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXC4P09017 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXC4P09017 ZNF849P-201ENST00000594711 1566 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HOXC4P09017 RNU6-851P-201ENST00000384565 107 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 MIR525-201ENST00000384978 85 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 MIR513B-201ENST00000385136 84 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AL138880.1-201ENST00000405824 642 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 RPL32P35-201ENST00000415214 394 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC4P09017 USP9YP24-201ENST00000434374 697 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 MTCO2P20-201ENST00000437339 673 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC4P09017 USP9YP17-201ENST00000444617 696 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AC004022.1-201ENST00000447766 1066 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC4P09017 NAP1L1P3-201ENST00000462291 880 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 RPS4XP13-201ENST00000483219 789 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC4P09017 AC108078.3-201ENST00000502633 489 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 RNA5SP385-201ENST00000515947 110 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 RNU6-202P-201ENST00000515998 96 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 RNU1-143P-201ENST00000516296 146 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AC087897.1-201ENST00000550134 156 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AC095057.3-201ENST00000567102 1157 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 MIR3690-201ENST00000580266 75 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXC4P09017 AC245036.5-201ENST00000596330 847 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 VN1R87P-201ENST00000596706 487 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXC4P09017 AC008751.2-201ENST00000597885 980 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC4P09017 AC113368.1-201ENST00000603736 382 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AC024060.1-201ENST00000607052 494 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 AC096586.1-201ENST00000610267 561 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 U1.23-201ENST00000610293 146 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 PART1_2.1-201ENST00000612397 250 ntBASIC3.01□□□□□ -1.93
HOXC4P09017 RNU1-68P-201ENST00000615382 146 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms