Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SFTPBP07988 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPBP07988 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.18□□□□□ -1.9
SFTPBP07988 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
SFTPBP07988 AC005539.1-201ENST00000443768 1479 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPBP07988 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SFTPBP07988 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPBP07988 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPBP07988 RNA5SP295-201ENST00000362655 121 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 RNU6-289P-201ENST00000364093 107 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 SNORD46.1-201ENST00000364139 104 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 RNU6-83P-201ENST00000384568 112 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 MIR449B-201ENST00000384995 97 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.18□□□□□ -1.9
SFTPBP07988 AL136372.1-201ENST00000403060 228 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.18□□□□□ -1.9
SFTPBP07988 RNU2-43P-201ENST00000410306 190 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 RNA5SP44-201ENST00000410446 133 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 RNU4-65P-201ENST00000410473 140 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 SNORA57.3-201ENST00000411095 141 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.18□□□□□ -1.9
SFTPBP07988 MTCYBP38-201ENST00000417160 1123 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.18□□□□□ -1.9
SFTPBP07988 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.18□□□□□ -1.9
SFTPBP07988 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.18□□□□□ -1.9
SFTPBP07988 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.18□□□□□ -1.9
SFTPBP07988 RPS29P31-201ENST00000446147 164 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 AL133547.1-201ENST00000448546 220 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 MTND1P31-201ENST00000449206 961 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 AC006480.1-201ENST00000449887 378 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.18□□□□□ -1.9
SFTPBP07988 AC012181.1-201ENST00000479895 423 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.18□□□□□ -1.9
SFTPBP07988 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.18□□□□□ -1.9
SFTPBP07988 RNA5SP164-201ENST00000516533 110 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 SCARNA14-201ENST00000516903 136 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.18□□□□□ -1.9
SFTPBP07988 COX6CP8-201ENST00000522620 226 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SFTPBP07988 HIGD1AP10-201ENST00000527837 282 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPBP07988 AL391156.1-201ENST00000554965 554 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.18□□□□□ -1.9
SFTPBP07988 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.18□□□□□ -1.9
SFTPBP07988 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.18□□□□□ -1.9
SFTPBP07988 AC006960.3-201ENST00000561845 705 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 AC087499.8-201ENST00000578406 226 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 MIR4444-1-201ENST00000581696 74 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 MIR4444-2-201ENST00000584390 74 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 AL133507.1-201ENST00000605269 557 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 AL450489.1-201ENST00000612071 468 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.18□□□□□ -1.9
SFTPBP07988 XIST_intron.1-201ENST00000619444 68 ntBASIC3.18□□□□□ -1.9
SFTPBP07988 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPBP07988 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPBP07988 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SFTPBP07988 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPBP07988 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SFTPBP07988 AC073073.2-201ENST00000609827 2578 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SFTPBP07988 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SFTPBP07988 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
SFTPBP07988 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.17□□□□□ -1.9
SFTPBP07988 ZNF876P-202ENST00000398732 1485 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 AP004289.2-201ENST00000444413 1457 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SFTPBP07988 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SFTPBP07988 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SFTPBP07988 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.17□□□□□ -1.9
SFTPBP07988 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SFTPBP07988 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SFTPBP07988 RNA5SP124-201ENST00000362739 110 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SFTPBP07988 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SFTPBP07988 RNA5SP424-201ENST00000390988 115 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 SOD2P1-201ENST00000396543 562 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 RPS3AP24-201ENST00000407896 734 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 U3.42-201ENST00000408746 214 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 RN7SKP285-201ENST00000410137 318 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 AC109780.2-201ENST00000413467 845 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SFTPBP07988 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPBP07988 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPBP07988 AC069157.1-201ENST00000421749 137 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 BX119904.4-201ENST00000424402 301 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 AC024082.2-201ENST00000434771 238 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 NDUFB1P1-201ENST00000435191 180 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 THAP5P1-201ENST00000439089 262 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.17□□□□□ -1.9
SFTPBP07988 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SFTPBP07988 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.17□□□□□ -1.9
SFTPBP07988 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.17□□□□□ -1.9
SFTPBP07988 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.17□□□□□ -1.9
SFTPBP07988 AC010468.1-201ENST00000461022 817 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 AC108860.1-201ENST00000484521 383 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 HMGB1P36-201ENST00000487709 576 ntBASIC3.17□□□□□ -1.9
SFTPBP07988 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms