Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 U2.5-201ENST00000619465 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.10-201ENST00000620268 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.66□□□□□ -1.98
COL1A1P02452 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
COL1A1P02452 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL1A1P02452 Y_RNA.140-201ENST00000363474 103 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 U8.9-201ENST00000365667 134 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
COL1A1P02452 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.65□□□□□ -1.98
COL1A1P02452 HMGB1P13-201ENST00000406019 642 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.65□□□□□ -1.98
COL1A1P02452 AL121882.1-201ENST00000422893 417 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.65□□□□□ -1.98
COL1A1P02452 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.65□□□□□ -1.98
COL1A1P02452 CALM1P2-201ENST00000452941 448 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.65□□□□□ -1.98
COL1A1P02452 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.65□□□□□ -1.98
COL1A1P02452 NPM1P52-201ENST00000518264 846 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 AP004242.1-201ENST00000533701 349 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.65□□□□□ -1.98
COL1A1P02452 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.65□□□□□ -1.98
COL1A1P02452 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.65□□□□□ -1.98
COL1A1P02452 ZNF192P1-203ENST00000565888 810 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 MIR4781-201ENST00000585250 76 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.65□□□□□ -1.98
COL1A1P02452 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.65□□□□□ -1.98
COL1A1P02452 AC018754.1-201ENST00000607486 925 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 AC048347.1-201ENST00000624621 427 ntBASIC2.65□□□□□ -1.98
COL1A1P02452 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
COL1A1P02452 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.65□□□□□ -1.99
COL1A1P02452 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL1A1P02452 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COL1A1P02452 SNORA67.3-201ENST00000384366 140 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 RNU6-14P-201ENST00000384630 106 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 SAR1AP2-201ENST00000392696 594 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 DHFRP5-201ENST00000406944 564 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.65□□□□□ -1.99
COL1A1P02452 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.65□□□□□ -1.99
COL1A1P02452 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.65□□□□□ -1.99
COL1A1P02452 MORF4L1P6-201ENST00000418771 268 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 RPL31P45-201ENST00000419532 356 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 AL592045.1-201ENST00000429867 352 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.65□□□□□ -1.99
COL1A1P02452 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.65□□□□□ -1.99
COL1A1P02452 AC245517.4-201ENST00000448601 281 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.65□□□□□ -1.99
COL1A1P02452 TRBV26-201ENST00000456572 344 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 WWP1P1-201ENST00000466609 2769 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 AC008571.1-201ENST00000467232 300 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.65□□□□□ -1.99
COL1A1P02452 OR4R2P-201ENST00000530815 597 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 AC010198.2-201ENST00000550612 259 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.65□□□□□ -1.99
COL1A1P02452 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.65□□□□□ -1.99
COL1A1P02452 AL592494.3-201ENST00000609485 464 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 XIST_intron.1-201ENST00000619444 68 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.65□□□□□ -1.99
COL1A1P02452 MIR6132-201ENST00000622083 109 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.65□□□□□ -1.99
COL1A1P02452 AC093591.3-201ENST00000634516 308 ntBASIC2.65□□□□□ -1.99
COL1A1P02452 AC091152.2-201ENST00000591628 2569 ntBASIC2.64□□□□□ -1.99
COL1A1P02452 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.64□□□□□ -1.99
COL1A1P02452 AC005539.1-201ENST00000443768 1479 ntBASIC2.64□□□□□ -1.99
COL1A1P02452 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL1A1P02452 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.64□□□□□ -1.99
COL1A1P02452 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.64□□□□□ -1.99
COL1A1P02452 ELOCP6-201ENST00000429066 328 ntBASIC2.64□□□□□ -1.99
COL1A1P02452 ELOCP12-201ENST00000458706 328 ntBASIC2.64□□□□□ -1.99
COL1A1P02452 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.64□□□□□ -1.99
COL1A1P02452 AC108729.3-201ENST00000513484 108 ntBASIC2.64□□□□□ -1.99
COL1A1P02452 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.64□□□□□ -1.99
COL1A1P02452 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.64□□□□□ -1.99
COL1A1P02452 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.64□□□□□ -1.99
COL1A1P02452 AL356575.1-201ENST00000603008 283 ntBASIC2.64□□□□□ -1.99
COL1A1P02452 AP000787.2-201ENST00000604432 568 ntBASIC2.64□□□□□ -1.99
COL1A1P02452 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
COL1A1P02452 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL1A1P02452 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL1A1P02452 U8.13-201ENST00000390842 128 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 RPS7P5-201ENST00000441482 581 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.63□□□□□ -1.99
COL1A1P02452 RN7SKP210-201ENST00000459176 261 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 AP000926.3-201ENST00000497201 299 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL1A1P02452 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.63□□□□□ -1.99
COL1A1P02452 RNU6-1053P-201ENST00000515930 101 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 SCARNA17.1-201ENST00000516211 143 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 SCARNA17.2-201ENST00000516334 143 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 AC234775.3-201ENST00000564612 656 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 AC103710.2-201ENST00000609912 942 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 SCARNA17.4-201ENST00000614296 143 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.63□□□□□ -1.99
COL1A1P02452 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL1A1P02452 MTND5P29-201ENST00000458676 1807 ntBASIC2.63□□□□□ -1.99
COL1A1P02452 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL1A1P02452 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL1A1P02452 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.62□□□□□ -1.99
COL1A1P02452 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms