Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 LLPHP1-201ENST00000603571 367 ntBASIC1.84□□□□□ -2.11
ABCA1O95477 AC245517.5-201ENST00000611529 162 ntBASIC1.84□□□□□ -2.11
ABCA1O95477 AC010378.1-201ENST00000619270 362 ntBASIC1.84□□□□□ -2.11
ABCA1O95477 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.84□□□□□ -2.11
ABCA1O95477 AC116563.2-201ENST00000624751 535 ntBASIC1.84□□□□□ -2.11
ABCA1O95477 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ABCA1O95477 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.84□□□□□ -2.11
ABCA1O95477 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
ABCA1O95477 NSRP1P1-201ENST00000444067 1693 ntBASIC1.84□□□□□ -2.11
ABCA1O95477 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.84□□□□□ -2.11
ABCA1O95477 AL356292.1-201ENST00000283110 373 ntBASIC1.84□□□□□ -2.12
ABCA1O95477 SNORA25.9-201ENST00000365087 128 ntBASIC1.84□□□□□ -2.12
ABCA1O95477 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ABCA1O95477 SNORA26.9-201ENST00000391322 122 ntBASIC1.84□□□□□ -2.12
ABCA1O95477 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.84□□□□□ -2.12
ABCA1O95477 AC004866.2-201ENST00000438285 481 ntBASIC1.84□□□□□ -2.12
ABCA1O95477 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.84□□□□□ -2.12
ABCA1O95477 AC092754.2-201ENST00000463506 460 ntBASIC1.84□□□□□ -2.12
ABCA1O95477 AC012181.1-201ENST00000479895 423 ntBASIC1.84□□□□□ -2.12
ABCA1O95477 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.84□□□□□ -2.12
ABCA1O95477 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.84□□□□□ -2.12
ABCA1O95477 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.84□□□□□ -2.12
ABCA1O95477 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.84□□□□□ -2.12
ABCA1O95477 MIR4781-201ENST00000585250 76 ntBASIC1.84□□□□□ -2.12
ABCA1O95477 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.84□□□□□ -2.12
ABCA1O95477 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.84□□□□□ -2.12
ABCA1O95477 AC018754.1-201ENST00000607486 925 ntBASIC1.84□□□□□ -2.12
ABCA1O95477 AP003072.4-201ENST00000624580 310 ntBASIC1.84□□□□□ -2.12
ABCA1O95477 PISRT1-201ENST00000626175 531 ntBASIC1.84□□□□□ -2.12
ABCA1O95477 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.84□□□□□ -2.12
ABCA1O95477 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.84□□□□□ -2.12
ABCA1O95477 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.83□□□□□ -2.12
ABCA1O95477 Y_RNA.508-201ENST00000384502 114 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 DHFRP5-201ENST00000406944 564 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 RPL30P3-201ENST00000424262 333 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA1O95477 RNU7-27P-201ENST00000459281 62 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 SNRPGP3-201ENST00000469405 227 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 LARP7P4-201ENST00000481075 878 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.83□□□□□ -2.12
ABCA1O95477 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC1.83□□□□□ -2.12
ABCA1O95477 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.83□□□□□ -2.12
ABCA1O95477 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.83□□□□□ -2.12
ABCA1O95477 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.83□□□□□ -2.12
ABCA1O95477 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA1O95477 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.83□□□□□ -2.12
ABCA1O95477 GNAI2P1-201ENST00000541815 315 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 SUB1P3-201ENST00000564581 315 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.83□□□□□ -2.12
ABCA1O95477 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA1O95477 AC000367.1-201ENST00000452711 1766 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 API5P2-201ENST00000397055 1498 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
ABCA1O95477 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.83□□□□□ -2.12
ABCA1O95477 MTND5P7-201ENST00000413558 1798 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.83□□□□□ -2.12
ABCA1O95477 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
ABCA1O95477 SNORA11.4-201ENST00000408823 129 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 AL009174.1-201ENST00000426577 416 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 CR769767.1-201ENST00000436337 346 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 RPS27P5-201ENST00000444247 244 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 AC146507.1-201ENST00000468335 354 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.83□□□□□ -2.12
ABCA1O95477 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA1O95477 TMEM248P1-201ENST00000510579 951 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA1O95477 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA1O95477 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA1O95477 MIR7973-1-201ENST00000614683 76 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 AP003072.5-201ENST00000623872 773 ntBASIC1.83□□□□□ -2.12
ABCA1O95477 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ABCA1O95477 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ABCA1O95477 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ABCA1O95477 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.82□□□□□ -2.12
ABCA1O95477 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.82□□□□□ -2.12
ABCA1O95477 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.82□□□□□ -2.12
ABCA1O95477 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.82□□□□□ -2.12
ABCA1O95477 AC245517.4-201ENST00000448601 281 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ABCA1O95477 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.82□□□□□ -2.12
ABCA1O95477 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.82□□□□□ -2.12
ABCA1O95477 AC005156.1-201ENST00000613371 573 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 MIR8070-201ENST00000616510 88 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.82□□□□□ -2.12
ABCA1O95477 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.82□□□□□ -2.12
ABCA1O95477 MIR583-201ENST00000384846 75 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 BTBD10P2-201ENST00000404779 676 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.82□□□□□ -2.12
ABCA1O95477 MTCYBP31-201ENST00000438855 1122 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 RPL37P6-202ENST00000464216 403 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 OR5H4P-201ENST00000510851 923 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 AC026412.2-201ENST00000512270 1075 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 RN7SKP219-201ENST00000516825 296 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 AC004486.1-201ENST00000546846 233 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 AC084373.1-201ENST00000603311 235 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 AC103710.1-201ENST00000610003 901 ntBASIC1.82□□□□□ -2.12
ABCA1O95477 XIST_intron.1-201ENST00000619444 68 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms