Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MTCO2P32-201ENST00000514865 403 ntBASIC4.2□□□□□ -1.74
MBD4O95243 RNA5SP216-201ENST00000516111 123 ntBASIC4.2□□□□□ -1.74
MBD4O95243 SNORA70.14-201ENST00000516205 110 ntBASIC4.2□□□□□ -1.74
MBD4O95243 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.2□□□□□ -1.74
MBD4O95243 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.2□□□□□ -1.74
MBD4O95243 CR383656.7-201ENST00000548164 174 ntBASIC4.2□□□□□ -1.74
MBD4O95243 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MBD4O95243 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.2□□□□□ -1.74
MBD4O95243 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.2□□□□□ -1.74
MBD4O95243 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.2□□□□□ -1.74
MBD4O95243 BBIP1P1-201ENST00000602999 279 ntBASIC4.2□□□□□ -1.74
MBD4O95243 AC004853.1-201ENST00000604902 698 ntBASIC4.2□□□□□ -1.74
MBD4O95243 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.2□□□□□ -1.74
MBD4O95243 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MBD4O95243 AL672296.1-201ENST00000427780 2158 ntBASIC4.2□□□□□ -1.74
MBD4O95243 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.2□□□□□ -1.74
MBD4O95243 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.2□□□□□ -1.74
MBD4O95243 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MBD4O95243 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.19□□□□□ -1.74
MBD4O95243 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
MBD4O95243 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD4O95243 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MBD4O95243 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD4O95243 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.19□□□□□ -1.74
MBD4O95243 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MBD4O95243 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
MBD4O95243 PRO1804-201ENST00000623780 2050 ntBASIC4.19□□□□□ -1.74
MBD4O95243 MIR208A-201ENST00000362287 71 ntBASIC4.19□□□□□ -1.74
MBD4O95243 RNU6-1155P-201ENST00000363554 107 ntBASIC4.19□□□□□ -1.74
MBD4O95243 RNU6-952P-201ENST00000391164 108 ntBASIC4.19□□□□□ -1.74
MBD4O95243 RN7SKP56-201ENST00000410513 331 ntBASIC4.19□□□□□ -1.74
MBD4O95243 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD4O95243 BX842559.1-201ENST00000419615 532 ntBASIC4.19□□□□□ -1.74
MBD4O95243 MTCO2P21-201ENST00000419780 677 ntBASIC4.19□□□□□ -1.74
MBD4O95243 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD4O95243 CYCSP35-201ENST00000451978 304 ntBASIC4.19□□□□□ -1.74
MBD4O95243 PRSS3P4-201ENST00000453323 162 ntBASIC4.19□□□□□ -1.74
MBD4O95243 RN7SL594P-201ENST00000470590 287 ntBASIC4.19□□□□□ -1.74
MBD4O95243 RPL7P49-201ENST00000471402 708 ntBASIC4.19□□□□□ -1.74
MBD4O95243 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
MBD4O95243 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.19□□□□□ -1.74
MBD4O95243 RNA5SP468-201ENST00000516782 93 ntBASIC4.19□□□□□ -1.74
MBD4O95243 RN7SKP289-201ENST00000517244 295 ntBASIC4.19□□□□□ -1.74
MBD4O95243 NARSP2-201ENST00000518524 679 ntBASIC4.19□□□□□ -1.74
MBD4O95243 AP006245.1-201ENST00000522549 120 ntBASIC4.19□□□□□ -1.74
MBD4O95243 COX6CP8-201ENST00000522620 226 ntBASIC4.19□□□□□ -1.74
MBD4O95243 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD4O95243 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD4O95243 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD4O95243 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD4O95243 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.19□□□□□ -1.74
MBD4O95243 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.19□□□□□ -1.74
MBD4O95243 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.19□□□□□ -1.74
MBD4O95243 AL354943.1-201ENST00000572103 781 ntBASIC4.19□□□□□ -1.74
MBD4O95243 DUXAP11-201ENST00000603858 526 ntBASIC4.19□□□□□ -1.74
MBD4O95243 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.19□□□□□ -1.74
MBD4O95243 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
MBD4O95243 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.19□□□□□ -1.74
MBD4O95243 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.18□□□□□ -1.74
MBD4O95243 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
MBD4O95243 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
MBD4O95243 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
MBD4O95243 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MBD4O95243 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MBD4O95243 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
MBD4O95243 RNU6-50P-201ENST00000362356 103 ntBASIC4.18□□□□□ -1.74
MBD4O95243 RNA5SP50-201ENST00000363731 107 ntBASIC4.18□□□□□ -1.74
MBD4O95243 SNORA4.1-201ENST00000364263 144 ntBASIC4.18□□□□□ -1.74
MBD4O95243 AL391417.1-201ENST00000404100 426 ntBASIC4.18□□□□□ -1.74
MBD4O95243 RNA5SP44-201ENST00000410446 133 ntBASIC4.18□□□□□ -1.74
MBD4O95243 RHEBP3-201ENST00000411920 351 ntBASIC4.18□□□□□ -1.74
MBD4O95243 AP000907.1-201ENST00000428428 510 ntBASIC4.18□□□□□ -1.74
MBD4O95243 BX322784.1-201ENST00000455793 1077 ntBASIC4.18□□□□□ -1.74
MBD4O95243 HMGN2P16-201ENST00000456802 261 ntBASIC4.18□□□□□ -1.74
MBD4O95243 CEACAMP4-201ENST00000457676 421 ntBASIC4.18□□□□□ -1.74
MBD4O95243 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.18□□□□□ -1.74
MBD4O95243 MTND2P14-201ENST00000482139 351 ntBASIC4.18□□□□□ -1.74
MBD4O95243 NIPA2P2-201ENST00000496376 1083 ntBASIC4.18□□□□□ -1.74
MBD4O95243 KLHL2P1-201ENST00000508691 521 ntBASIC4.18□□□□□ -1.74
MBD4O95243 NDUFB4P9-201ENST00000511646 388 ntBASIC4.18□□□□□ -1.74
MBD4O95243 EEF1A1P37-201ENST00000522748 715 ntBASIC4.18□□□□□ -1.74
MBD4O95243 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.18□□□□□ -1.74
MBD4O95243 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.18□□□□□ -1.74
MBD4O95243 OR6C7P-201ENST00000547875 934 ntBASIC4.18□□□□□ -1.74
MBD4O95243 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.18□□□□□ -1.74
MBD4O95243 AC009097.3-201ENST00000563557 1018 ntBASIC4.18□□□□□ -1.74
MBD4O95243 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.18□□□□□ -1.74
MBD4O95243 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.18□□□□□ -1.74
MBD4O95243 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.18□□□□□ -1.74
MBD4O95243 AL596327.1-201ENST00000603629 213 ntBASIC4.18□□□□□ -1.74
MBD4O95243 AC084757.4-201ENST00000616350 526 ntBASIC4.18□□□□□ -1.74
MBD4O95243 MIR7975-201ENST00000619350 68 ntBASIC4.18□□□□□ -1.74
MBD4O95243 AL353748.2-201ENST00000622148 471 ntBASIC4.18□□□□□ -1.74
MBD4O95243 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.18□□□□□ -1.74
MBD4O95243 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.18□□□□□ -1.74
MBD4O95243 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.18□□□□□ -1.74
MBD4O95243 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.18□□□□□ -1.74
MBD4O95243 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.18□□□□□ -1.74
MBD4O95243 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
MBD4O95243 AC011477.1-204ENST00000623416 1325 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms