Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNA5SP402-201ENST00000517148 110 ntBASIC2.49□□□□□ -2.01
UPK1BO75841 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.49□□□□□ -2.01
UPK1BO75841 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
UPK1BO75841 AC113192.3-201ENST00000529152 742 ntBASIC2.49□□□□□ -2.01
UPK1BO75841 AP003049.1-201ENST00000529418 457 ntBASIC2.49□□□□□ -2.01
UPK1BO75841 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.49□□□□□ -2.01
UPK1BO75841 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.49□□□□□ -2.01
UPK1BO75841 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.49□□□□□ -2.01
UPK1BO75841 AC122134.1-202ENST00000569111 1201 ntBASIC2.49□□□□□ -2.01
UPK1BO75841 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.49□□□□□ -2.01
UPK1BO75841 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.49□□□□□ -2.01
UPK1BO75841 MIR4284-201ENST00000578924 81 ntBASIC2.49□□□□□ -2.01
UPK1BO75841 MIR4666A-201ENST00000580160 79 ntBASIC2.49□□□□□ -2.01
UPK1BO75841 AC104785.1-201ENST00000603220 588 ntBASIC2.49□□□□□ -2.01
UPK1BO75841 HSPE1P7-201ENST00000604681 321 ntBASIC2.49□□□□□ -2.01
UPK1BO75841 SNHG22-203ENST00000617833 660 ntBASIC2.49□□□□□ -2.01
UPK1BO75841 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.49□□□□□ -2.01
UPK1BO75841 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.49□□□□□ -2.01
UPK1BO75841 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.49□□□□□ -2.01
UPK1BO75841 SPRR2C-201ENST00000290702 219 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UPK1BO75841 RNU5D-1-201ENST00000363299 116 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 RNU6-1066P-201ENST00000363573 105 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.48□□□□□ -2.01
UPK1BO75841 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
UPK1BO75841 AL355615.1-201ENST00000406187 641 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC245052.5-201ENST00000416320 649 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
UPK1BO75841 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.48□□□□□ -2.01
UPK1BO75841 AC016712.1-201ENST00000431088 378 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC073143.1-201ENST00000436316 395 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC004866.2-201ENST00000438285 481 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.48□□□□□ -2.01
UPK1BO75841 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.48□□□□□ -2.01
UPK1BO75841 RFC5P1-201ENST00000454419 874 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC092757.1-201ENST00000467293 467 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
UPK1BO75841 VN1R105P-201ENST00000486595 910 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.48□□□□□ -2.01
UPK1BO75841 snoZ278.1-201ENST00000517059 112 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 OR5AK1P-201ENST00000524837 922 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.48□□□□□ -2.01
UPK1BO75841 AC068339.2-201ENST00000534395 618 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
UPK1BO75841 CYB5AP5-201ENST00000549779 389 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC093510.2-201ENST00000562820 896 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.48□□□□□ -2.01
UPK1BO75841 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.48□□□□□ -2.01
UPK1BO75841 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.48□□□□□ -2.01
UPK1BO75841 MIR3922-201ENST00000585192 84 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC068790.4-201ENST00000602474 263 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC096947.1-201ENST00000603233 470 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC012443.1-201ENST00000605605 231 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC091946.2-201ENST00000606105 291 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.48□□□□□ -2.01
UPK1BO75841 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
UPK1BO75841 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.48□□□□□ -2.01
UPK1BO75841 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.48□□□□□ -2.01
UPK1BO75841 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.47□□□□□ -2.01
UPK1BO75841 RNU6-468P-201ENST00000384003 109 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1BO75841 RPL26P29-201ENST00000415623 438 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1BO75841 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1BO75841 AL512637.2-201ENST00000431287 1256 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1BO75841 VN1R10P-201ENST00000447106 875 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 TPT1P12-201ENST00000448968 492 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.47□□□□□ -2.01
UPK1BO75841 MRPL42P4-201ENST00000453267 443 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 OR4G11P-201ENST00000492842 939 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 AIG1P1-201ENST00000503376 148 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1BO75841 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1BO75841 AC024224.1-201ENST00000538284 609 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 AC138761.3-201ENST00000579993 334 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1BO75841 AL049779.4-201ENST00000604500 156 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 AP001521.1-201ENST00000609150 300 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 AL356585.4-201ENST00000623078 1229 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 MIR622-201ENST00000638396 96 ntBASIC2.47□□□□□ -2.01
UPK1BO75841 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1BO75841 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.46□□□□□ -2.01
UPK1BO75841 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
UPK1BO75841 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
UPK1BO75841 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
UPK1BO75841 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
UPK1BO75841 RNU1-32P-201ENST00000363937 159 ntBASIC2.46□□□□□ -2.02
UPK1BO75841 RNU6-882P-201ENST00000391025 103 ntBASIC2.46□□□□□ -2.02
UPK1BO75841 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UPK1BO75841 USP9YP19-201ENST00000412165 485 ntBASIC2.46□□□□□ -2.02
UPK1BO75841 AC063979.1-201ENST00000415539 377 ntBASIC2.46□□□□□ -2.02
UPK1BO75841 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1BO75841 TMEM167AP1-201ENST00000423409 219 ntBASIC2.46□□□□□ -2.02
UPK1BO75841 AC092393.1-201ENST00000439625 742 ntBASIC2.46□□□□□ -2.02
UPK1BO75841 Z95327.1-201ENST00000446082 482 ntBASIC2.46□□□□□ -2.02
UPK1BO75841 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.46□□□□□ -2.02
UPK1BO75841 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1BO75841 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.46□□□□□ -2.02
UPK1BO75841 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms