Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC018634.1-201ENST00000437554 401 ntBASIC3.28□□□□□ -1.88
NPHP4O75161 LINC00888-204ENST00000487386 421 ntBASIC3.28□□□□□ -1.88
NPHP4O75161 SUMO1P1-201ENST00000497904 306 ntBASIC3.28□□□□□ -1.88
NPHP4O75161 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.28□□□□□ -1.88
NPHP4O75161 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.28□□□□□ -1.88
NPHP4O75161 OR4K7P-201ENST00000580232 945 ntBASIC3.28□□□□□ -1.88
NPHP4O75161 NF1P5-201ENST00000588287 448 ntBASIC3.28□□□□□ -1.88
NPHP4O75161 AP001542.1-201ENST00000591314 200 ntBASIC3.28□□□□□ -1.88
NPHP4O75161 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.28□□□□□ -1.88
NPHP4O75161 MTND5P28-201ENST00000438005 1594 ntBASIC3.28□□□□□ -1.88
NPHP4O75161 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPHP4O75161 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.28□□□□□ -1.89
NPHP4O75161 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPHP4O75161 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPHP4O75161 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NPHP4O75161 RPS20P25-201ENST00000412447 352 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AL158825.1-201ENST00000414735 521 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AL353093.1-201ENST00000441292 436 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 RPL30P11-201ENST00000495304 339 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 RNU6-889P-201ENST00000517189 103 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP4O75161 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP4O75161 MTCYBP20-201ENST00000524239 1129 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP4O75161 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.27□□□□□ -1.89
NPHP4O75161 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP4O75161 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP4O75161 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP4O75161 AC006116.7-201ENST00000590141 756 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AL022099.1-201ENST00000604551 712 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 MIR7973-1-201ENST00000614683 76 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NPHP4O75161 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.27□□□□□ -1.89
NPHP4O75161 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.27□□□□□ -1.89
NPHP4O75161 AL359893.1-201ENST00000447628 1580 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 GABPAP-201ENST00000419271 1356 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NPHP4O75161 Y_RNA.40-201ENST00000362645 93 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPHP4O75161 RNA5SP129-201ENST00000410276 118 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 RNA5SP344-201ENST00000411081 104 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.27□□□□□ -1.89
NPHP4O75161 CYCSP49-201ENST00000420810 319 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.27□□□□□ -1.89
NPHP4O75161 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.27□□□□□ -1.89
NPHP4O75161 AC090543.1-201ENST00000492168 485 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AC093770.1-201ENST00000511559 571 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.27□□□□□ -1.89
NPHP4O75161 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.27□□□□□ -1.89
NPHP4O75161 AL161713.1-201ENST00000555538 145 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AC025281.1-201ENST00000567026 265 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AC061975.8-201ENST00000587058 721 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AC011494.1-201ENST00000596454 237 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 ABI1P1-201ENST00000603375 1120 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AC009570.1-201ENST00000609599 745 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.27□□□□□ -1.89
NPHP4O75161 FRG1DP-201ENST00000635586 771 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 MIR219B-201ENST00000637023 88 ntBASIC3.27□□□□□ -1.89
NPHP4O75161 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPHP4O75161 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPHP4O75161 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.26□□□□□ -1.89
NPHP4O75161 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NPHP4O75161 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.26□□□□□ -1.89
NPHP4O75161 Y_RNA.269-201ENST00000364685 89 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 SNORA67.3-201ENST00000384366 140 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 MTCO2P17-201ENST00000424336 677 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 MED6P1-201ENST00000439659 713 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 TPMTP4-201ENST00000450749 678 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.26□□□□□ -1.89
NPHP4O75161 VN1R17P-201ENST00000472048 1090 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 AC103975.1-201ENST00000482506 483 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 RPL9P33-201ENST00000484311 566 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 RPL36AP21-201ENST00000490372 323 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 MTCO1P31-201ENST00000506355 492 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
NPHP4O75161 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.26□□□□□ -1.89
NPHP4O75161 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.26□□□□□ -1.89
NPHP4O75161 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.26□□□□□ -1.89
NPHP4O75161 ZNF92P3-201ENST00000596594 954 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.26□□□□□ -1.89
NPHP4O75161 AC067747.1-201ENST00000608026 250 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 C2orf27A-204ENST00000623058 969 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 Z99496.1-201ENST00000469424 1477 ntBASIC3.26□□□□□ -1.89
NPHP4O75161 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.25□□□□□ -1.89
NPHP4O75161 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
NPHP4O75161 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NPHP4O75161 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.25□□□□□ -1.89
NPHP4O75161 MIR124-3-201ENST00000384866 87 ntBASIC3.25□□□□□ -1.89
NPHP4O75161 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NPHP4O75161 AL162578.1-201ENST00000406202 378 ntBASIC3.25□□□□□ -1.89
NPHP4O75161 AL512504.1-201ENST00000415494 778 ntBASIC3.25□□□□□ -1.89
NPHP4O75161 AC244453.4-201ENST00000419150 388 ntBASIC3.25□□□□□ -1.89
NPHP4O75161 AC009414.1-201ENST00000427200 443 ntBASIC3.25□□□□□ -1.89
NPHP4O75161 MTCO1P57-201ENST00000432182 261 ntBASIC3.25□□□□□ -1.89
NPHP4O75161 RPL7P54-201ENST00000438336 674 ntBASIC3.25□□□□□ -1.89
NPHP4O75161 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.25□□□□□ -1.89
NPHP4O75161 TPTE2P6-202ENST00000445572 1007 ntBASIC3.25□□□□□ -1.89
NPHP4O75161 CFTRP1-201ENST00000456646 183 ntBASIC3.25□□□□□ -1.89
NPHP4O75161 AC072039.1-201ENST00000477611 581 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms