Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNHG22-203ENST00000617833 660 ntBASIC6.48□□□□□ -1.37
RNF40O75150 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF40O75150 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF40O75150 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF40O75150 AL591135.1-201ENST00000401578 5914 ntBASIC6.48□□□□□ -1.37
RNF40O75150 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
RNF40O75150 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF40O75150 AC022325.1-201ENST00000502748 2199 ntBASIC6.48□□□□□ -1.37
RNF40O75150 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF40O75150 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF40O75150 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF40O75150 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF40O75150 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF40O75150 AC093849.1-201ENST00000563631 2209 ntBASIC6.48□□□□□ -1.37
RNF40O75150 LINC02555-201ENST00000563933 1951 ntBASIC6.48□□□□□ -1.37
RNF40O75150 ADAM24P-201ENST00000398655 2101 ntBASIC6.47□□□□□ -1.37
RNF40O75150 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RNF40O75150 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RNF40O75150 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF40O75150 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF40O75150 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF40O75150 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF40O75150 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RNF40O75150 RNA5SP110-201ENST00000362638 115 ntBASIC6.47□□□□□ -1.37
RNF40O75150 RNA5SP346-201ENST00000363541 121 ntBASIC6.47□□□□□ -1.37
RNF40O75150 Y_RNA.383-201ENST00000383855 97 ntBASIC6.47□□□□□ -1.37
RNF40O75150 Y_RNA.480-201ENST00000384364 102 ntBASIC6.47□□□□□ -1.37
RNF40O75150 Y_RNA.533-201ENST00000384596 114 ntBASIC6.47□□□□□ -1.37
RNF40O75150 U3.39-201ENST00000408569 239 ntBASIC6.47□□□□□ -1.37
RNF40O75150 AC092423.1-201ENST00000430165 186 ntBASIC6.47□□□□□ -1.37
RNF40O75150 AL390119.1-201ENST00000440329 312 ntBASIC6.47□□□□□ -1.37
RNF40O75150 AC091180.1-201ENST00000462104 372 ntBASIC6.47□□□□□ -1.37
RNF40O75150 RN7SL714P-201ENST00000487050 298 ntBASIC6.47□□□□□ -1.37
RNF40O75150 AC010469.2-201ENST00000496412 480 ntBASIC6.47□□□□□ -1.37
RNF40O75150 AC074250.1-201ENST00000511117 192 ntBASIC6.47□□□□□ -1.37
RNF40O75150 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC6.47□□□□□ -1.37
RNF40O75150 ACA59.1-201ENST00000515966 143 ntBASIC6.47□□□□□ -1.37
RNF40O75150 RN7SKP238-201ENST00000516483 249 ntBASIC6.47□□□□□ -1.37
RNF40O75150 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.47□□□□□ -1.37
RNF40O75150 IGHVII-53-1-201ENST00000519538 255 ntBASIC6.47□□□□□ -1.37
RNF40O75150 RAB9BP1-201ENST00000519581 626 ntBASIC6.47□□□□□ -1.37
RNF40O75150 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF40O75150 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF40O75150 AC009120.3-201ENST00000563335 499 ntBASIC6.47□□□□□ -1.37
RNF40O75150 CPDP1-201ENST00000579660 283 ntBASIC6.47□□□□□ -1.37
RNF40O75150 MIR4273-201ENST00000582824 84 ntBASIC6.47□□□□□ -1.37
RNF40O75150 AL355816.1-201ENST00000607951 118 ntBASIC6.47□□□□□ -1.37
RNF40O75150 AC018445.2-201ENST00000622987 260 ntBASIC6.47□□□□□ -1.37
RNF40O75150 AC129915.3-201ENST00000634128 948 ntBASIC6.47□□□□□ -1.37
RNF40O75150 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF40O75150 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF40O75150 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF40O75150 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RNF40O75150 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF40O75150 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RNF40O75150 Z75746.1-201ENST00000440243 2080 ntBASIC6.46□□□□□ -1.37
RNF40O75150 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RNF40O75150 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF40O75150 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF40O75150 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF40O75150 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF40O75150 AC004076.2-201ENST00000620532 3323 ntBASIC6.46□□□□□ -1.38
RNF40O75150 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RNF40O75150 SNORA51.1-201ENST00000363243 140 ntBASIC6.46□□□□□ -1.38
RNF40O75150 Y_RNA.240-201ENST00000364469 95 ntBASIC6.46□□□□□ -1.38
RNF40O75150 RNY4P28-201ENST00000365281 93 ntBASIC6.46□□□□□ -1.38
RNF40O75150 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF40O75150 SNORA22C-201ENST00000384614 134 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AL080315.1-201ENST00000406055 466 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AC096921.1-201ENST00000411661 375 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF40O75150 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF40O75150 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF40O75150 EI24P4-201ENST00000423683 1078 ntBASIC6.46□□□□□ -1.38
RNF40O75150 BX276092.6-201ENST00000430476 250 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF40O75150 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.46□□□□□ -1.38
RNF40O75150 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF40O75150 BX276092.8-201ENST00000455722 250 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AC112187.1-201ENST00000455837 479 ntBASIC6.46□□□□□ -1.38
RNF40O75150 RPL31P60-201ENST00000478450 367 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AC113155.1-201ENST00000511141 769 ntBASIC6.46□□□□□ -1.38
RNF40O75150 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.46□□□□□ -1.38
RNF40O75150 Y_RNA.662-201ENST00000516028 97 ntBASIC6.46□□□□□ -1.38
RNF40O75150 RNA5SP340-201ENST00000517132 107 ntBASIC6.46□□□□□ -1.38
RNF40O75150 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF40O75150 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.46□□□□□ -1.38
RNF40O75150 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF40O75150 MIR132-201ENST00000591554 101 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AC011445.2-201ENST00000599274 173 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AC007566.2-201ENST00000603642 413 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AL158032.1-201ENST00000605401 106 ntBASIC6.46□□□□□ -1.38
RNF40O75150 AL161637.1-201ENST00000622380 412 ntBASIC6.46□□□□□ -1.38
RNF40O75150 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
RNF40O75150 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RNF40O75150 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF40O75150 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF40O75150 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF40O75150 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms