Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNVU1-3-201ENST00000364313 161 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 Y_RNA.238-201ENST00000364441 102 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 SNORA9.2-201ENST00000365361 133 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 Y_RNA.493-201ENST00000384422 102 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 RAP1BP1-201ENST00000412709 553 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHOX2O60902 COTL1P1-201ENST00000422309 375 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.8□□□□□ -1.96
SHOX2O60902 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHOX2O60902 AC005300.1-201ENST00000428401 373 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.8□□□□□ -1.96
SHOX2O60902 AC091862.1-201ENST00000438016 1100 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 MTND1P33-201ENST00000446251 917 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 FAM172BP-201ENST00000487497 1089 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHOX2O60902 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.8□□□□□ -1.96
SHOX2O60902 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.8□□□□□ -1.96
SHOX2O60902 RNU6-202P-201ENST00000515998 96 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.8□□□□□ -1.96
SHOX2O60902 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.8□□□□□ -1.96
SHOX2O60902 AC123904.3-201ENST00000547218 814 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.8□□□□□ -1.96
SHOX2O60902 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SHOX2O60902 AP001029.3-201ENST00000588063 596 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
SHOX2O60902 AC096947.1-201ENST00000603233 470 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 AL049779.4-201ENST00000604500 156 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.8□□□□□ -1.96
SHOX2O60902 FRG1HP-204ENST00000617940 757 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 AC092650.2-201ENST00000619984 902 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 AC097372.4-201ENST00000625025 466 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHOX2O60902 AC007336.1-201ENST00000576365 3828 ntBASIC2.8□□□□□ -1.96
SHOX2O60902 MTND5P11-201ENST00000511037 1812 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHOX2O60902 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SHOX2O60902 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.79□□□□□ -1.96
SHOX2O60902 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHOX2O60902 FRG1BP-201ENST00000278882 761 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHOX2O60902 RNU6-444P-201ENST00000383988 108 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 SNORA54-201ENST00000384281 123 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 RNU6-1226P-201ENST00000384317 107 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 ATP5F1P6-201ENST00000402768 767 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 RNA5SP120-201ENST00000410900 112 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 UBE2V1P9-201ENST00000414760 368 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 PNRC2P1-201ENST00000423940 420 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 AC096632.1-201ENST00000427395 310 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 AC093422.3-201ENST00000428506 305 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.79□□□□□ -1.96
SHOX2O60902 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.79□□□□□ -1.96
SHOX2O60902 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.79□□□□□ -1.96
SHOX2O60902 MTND5P8-201ENST00000449817 1083 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 AC140076.1-201ENST00000449897 361 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.79□□□□□ -1.96
SHOX2O60902 snoU13.4-201ENST00000458916 104 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 AC133134.1-201ENST00000466800 359 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 RPS20P22-201ENST00000473700 357 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 AC010301.1-201ENST00000473936 355 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.79□□□□□ -1.96
SHOX2O60902 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.79□□□□□ -1.96
SHOX2O60902 AC019227.1-201ENST00000526902 510 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
SHOX2O60902 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.79□□□□□ -1.96
SHOX2O60902 AC012493.2-201ENST00000595083 291 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.79□□□□□ -1.96
SHOX2O60902 AC013468.1-201ENST00000608680 598 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 AL110115.1-201ENST00000614396 364 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 AC018692.3-201ENST00000623929 123 ntBASIC2.79□□□□□ -1.96
SHOX2O60902 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHOX2O60902 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.79□□□□□ -1.96
SHOX2O60902 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.79□□□□□ -1.96
SHOX2O60902 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHOX2O60902 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.79□□□□□ -1.96
SHOX2O60902 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHOX2O60902 AC024341.1-201ENST00000526444 1552 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHOX2O60902 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHOX2O60902 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHOX2O60902 MAPK10-322ENST00000641485 4530 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AC109315.1-201ENST00000584143 1347 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 RNU6-263P-201ENST00000363811 107 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AC083799.1-201ENST00000366451 910 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 RNU6-339P-201ENST00000384310 107 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHOX2O60902 RNU6-1077P-201ENST00000410506 102 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AL139413.1-201ENST00000421309 217 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.78□□□□□ -1.96
SHOX2O60902 AC006548.1-201ENST00000427470 102 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AC114973.1-201ENST00000429057 632 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.78□□□□□ -1.96
SHOX2O60902 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.78□□□□□ -1.96
SHOX2O60902 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.78□□□□□ -1.96
SHOX2O60902 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.78□□□□□ -1.96
SHOX2O60902 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.78□□□□□ -1.96
SHOX2O60902 BX248409.1-201ENST00000455497 255 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms