Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 RPS27P27-201ENST00000498779 255 ntBASIC3.42□□□□□ -1.86
BRD4O60885 AC234781.5-201ENST00000508429 271 ntBASIC3.42□□□□□ -1.86
BRD4O60885 KLHL2P1-201ENST00000508691 521 ntBASIC3.42□□□□□ -1.86
BRD4O60885 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.42□□□□□ -1.86
BRD4O60885 RNA5SP468-201ENST00000516782 93 ntBASIC3.42□□□□□ -1.86
BRD4O60885 HMGB1P41-201ENST00000520234 440 ntBASIC3.42□□□□□ -1.86
BRD4O60885 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.42□□□□□ -1.86
BRD4O60885 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.42□□□□□ -1.86
BRD4O60885 AC073387.2-201ENST00000604797 784 ntBASIC3.42□□□□□ -1.86
BRD4O60885 AC007938.3-201ENST00000604965 623 ntBASIC3.42□□□□□ -1.86
BRD4O60885 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.42□□□□□ -1.86
BRD4O60885 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRD4O60885 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRD4O60885 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRD4O60885 RNA5SP456-201ENST00000364002 114 ntBASIC3.41□□□□□ -1.86
BRD4O60885 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.41□□□□□ -1.86
BRD4O60885 MIR1250-201ENST00000408098 113 ntBASIC3.41□□□□□ -1.86
BRD4O60885 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.41□□□□□ -1.86
BRD4O60885 AC104332.2-201ENST00000429959 156 ntBASIC3.41□□□□□ -1.86
BRD4O60885 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.41□□□□□ -1.86
BRD4O60885 AL591806.2-201ENST00000433122 173 ntBASIC3.41□□□□□ -1.86
BRD4O60885 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.41□□□□□ -1.86
BRD4O60885 RPS12P2-201ENST00000439728 269 ntBASIC3.41□□□□□ -1.86
BRD4O60885 ELOCP13-201ENST00000443934 329 ntBASIC3.41□□□□□ -1.86
BRD4O60885 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.41□□□□□ -1.86
BRD4O60885 AC034244.2-201ENST00000514668 858 ntBASIC3.41□□□□□ -1.86
BRD4O60885 RNU6-1073P-201ENST00000517182 106 ntBASIC3.41□□□□□ -1.86
BRD4O60885 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.41□□□□□ -1.86
BRD4O60885 CKS1BP7-201ENST00000522230 235 ntBASIC3.41□□□□□ -1.86
BRD4O60885 AP003717.3-201ENST00000544832 1180 ntBASIC3.41□□□□□ -1.86
BRD4O60885 AL354950.1-201ENST00000614150 568 ntBASIC3.41□□□□□ -1.86
BRD4O60885 U73479.1-201ENST00000618062 168 ntBASIC3.41□□□□□ -1.86
BRD4O60885 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.41□□□□□ -1.86
BRD4O60885 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.41□□□□□ -1.86
BRD4O60885 MTCO1P9-201ENST00000505577 1534 ntBASIC3.41□□□□□ -1.86
BRD4O60885 AL161431.1-201ENST00000618966 4205 ntBASIC3.41□□□□□ -1.86
BRD4O60885 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
BRD4O60885 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.41□□□□□ -1.86
BRD4O60885 AL136520.1-201ENST00000600311 1322 ntBASIC3.41□□□□□ -1.86
BRD4O60885 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
BRD4O60885 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.41□□□□□ -1.86
BRD4O60885 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
BRD4O60885 RNA5SP391-201ENST00000363456 119 ntBASIC3.4□□□□□ -1.86
BRD4O60885 MIR1289-2-201ENST00000408360 111 ntBASIC3.4□□□□□ -1.86
BRD4O60885 OR51A3P-201ENST00000413596 924 ntBASIC3.4□□□□□ -1.86
BRD4O60885 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.4□□□□□ -1.86
BRD4O60885 RPL36AP51-201ENST00000487216 318 ntBASIC3.4□□□□□ -1.86
BRD4O60885 AL024509.2-201ENST00000493462 493 ntBASIC3.4□□□□□ -1.86
BRD4O60885 RN7SL636P-201ENST00000497504 294 ntBASIC3.4□□□□□ -1.86
BRD4O60885 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
BRD4O60885 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.4□□□□□ -1.86
BRD4O60885 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.4□□□□□ -1.86
BRD4O60885 MIR1273D-201ENST00000577266 86 ntBASIC3.4□□□□□ -1.86
BRD4O60885 HMGN2P28-201ENST00000606102 262 ntBASIC3.4□□□□□ -1.86
BRD4O60885 AC025754.2-201ENST00000606491 432 ntBASIC3.4□□□□□ -1.86
BRD4O60885 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.86
BRD4O60885 AC090617.7-201ENST00000623952 126 ntBASIC3.4□□□□□ -1.86
BRD4O60885 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.4□□□□□ -1.86
BRD4O60885 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
BRD4O60885 AC087565.3-202ENST00000642085 1603 ntBASIC3.4□□□□□ -1.87
BRD4O60885 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.39□□□□□ -1.87
BRD4O60885 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRD4O60885 RPS15AP40-201ENST00000419621 391 ntBASIC3.39□□□□□ -1.87
BRD4O60885 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.39□□□□□ -1.87
BRD4O60885 AC096992.1-201ENST00000459808 709 ntBASIC3.39□□□□□ -1.87
BRD4O60885 AC104629.2-201ENST00000468627 598 ntBASIC3.39□□□□□ -1.87
BRD4O60885 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.39□□□□□ -1.87
BRD4O60885 AC109635.4-202ENST00000531666 412 ntBASIC3.39□□□□□ -1.87
BRD4O60885 AC128657.1-201ENST00000549459 145 ntBASIC3.39□□□□□ -1.87
BRD4O60885 AL442163.2-201ENST00000553912 710 ntBASIC3.39□□□□□ -1.87
BRD4O60885 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.39□□□□□ -1.87
BRD4O60885 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.39□□□□□ -1.87
BRD4O60885 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.39□□□□□ -1.87
BRD4O60885 DEFB109C-201ENST00000382575 264 ntBASIC3.38□□□□□ -1.87
BRD4O60885 DEFB109B-201ENST00000382656 264 ntBASIC3.38□□□□□ -1.87
BRD4O60885 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.38□□□□□ -1.87
BRD4O60885 NUP35P2-201ENST00000416748 943 ntBASIC3.38□□□□□ -1.87
BRD4O60885 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.38□□□□□ -1.87
BRD4O60885 RPL21P2-201ENST00000440049 481 ntBASIC3.38□□□□□ -1.87
BRD4O60885 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.38□□□□□ -1.87
BRD4O60885 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.38□□□□□ -1.87
BRD4O60885 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.38□□□□□ -1.87
BRD4O60885 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.38□□□□□ -1.87
BRD4O60885 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.38□□□□□ -1.87
BRD4O60885 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.38□□□□□ -1.87
BRD4O60885 MIR548Y-201ENST00000582739 110 ntBASIC3.38□□□□□ -1.87
BRD4O60885 MIR3670-2-201ENST00000582974 65 ntBASIC3.38□□□□□ -1.87
BRD4O60885 MIR3670-1-201ENST00000584160 65 ntBASIC3.38□□□□□ -1.87
BRD4O60885 MIR3670-3-201ENST00000584855 65 ntBASIC3.38□□□□□ -1.87
BRD4O60885 MIR3670-4-201ENST00000612260 65 ntBASIC3.38□□□□□ -1.87
BRD4O60885 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.38□□□□□ -1.87
BRD4O60885 MTND4P31-201ENST00000425607 1343 ntBASIC3.38□□□□□ -1.87
BRD4O60885 DEFA7P-201ENST00000382676 285 ntBASIC3.38□□□□□ -1.87
BRD4O60885 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
BRD4O60885 RNU6-244P-201ENST00000391028 104 ntBASIC3.38□□□□□ -1.87
BRD4O60885 AL162578.1-201ENST00000406202 378 ntBASIC3.38□□□□□ -1.87
BRD4O60885 RNA5SP247-201ENST00000411181 105 ntBASIC3.38□□□□□ -1.87
BRD4O60885 AC234782.4-201ENST00000417646 1048 ntBASIC3.38□□□□□ -1.87
BRD4O60885 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.38□□□□□ -1.87
BRD4O60885 AP000705.1-201ENST00000454567 350 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms