Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.88□□□□□ -1.47
GFRA3O60609 RNA5SP183-201ENST00000362452 119 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 Y_RNA.121-201ENST00000363309 113 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 Y_RNA.172-201ENST00000363765 102 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 Y_RNA.446-201ENST00000384178 104 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 MIR320B1-201ENST00000390209 79 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
GFRA3O60609 SNORD78.2-201ENST00000391076 69 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 AL590290.1-201ENST00000405336 380 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 RNA5SP487-201ENST00000410186 122 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 RNA5SP107-201ENST00000411358 122 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 EI24P4-201ENST00000423683 1078 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 AL591704.1-201ENST00000432574 275 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 AC005002.2-201ENST00000438228 269 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
GFRA3O60609 RANP2-201ENST00000456833 229 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 Y_RNA.651-201ENST00000459380 103 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 RN7SL51P-201ENST00000468230 285 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 RPL21P126-201ENST00000470049 478 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 AOX3P-204ENST00000491025 2107 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 AC006499.6-201ENST00000511169 607 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA3O60609 ERHP1-201ENST00000523006 310 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA3O60609 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.88□□□□□ -1.47
GFRA3O60609 AC126915.2-201ENST00000610957 190 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
GFRA3O60609 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 AC007996.1-201ENST00000620414 2821 ntBASIC5.88□□□□□ -1.47
GFRA3O60609 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA3O60609 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.87□□□□□ -1.47
GFRA3O60609 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA3O60609 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.87□□□□□ -1.47
GFRA3O60609 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA3O60609 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
GFRA3O60609 AL445437.1-201ENST00000623157 3087 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA3O60609 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
GFRA3O60609 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
GFRA3O60609 MIR410-201ENST00000362222 80 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 RNU1-46P-201ENST00000384425 164 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 RPL7AP73-201ENST00000413490 353 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 MRPL53P1-201ENST00000414323 319 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.87□□□□□ -1.47
GFRA3O60609 AC073069.1-201ENST00000428657 441 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 RPL12P17-201ENST00000432393 498 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.87□□□□□ -1.47
GFRA3O60609 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.87□□□□□ -1.47
GFRA3O60609 AC022431.1-201ENST00000450941 438 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 AC022034.3-201ENST00000471393 478 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 RPL7AP10-201ENST00000481016 791 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 AC083795.1-201ENST00000491760 320 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 MIR2355-201ENST00000517199 87 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.87□□□□□ -1.47
GFRA3O60609 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.87□□□□□ -1.47
GFRA3O60609 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
GFRA3O60609 BNIP3P1-201ENST00000547295 580 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.87□□□□□ -1.47
GFRA3O60609 HSPE1P2-201ENST00000554777 306 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.87□□□□□ -1.47
GFRA3O60609 AC099506.2-201ENST00000623074 221 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 CR381572.2-201ENST00000624852 397 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.87□□□□□ -1.47
GFRA3O60609 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.87□□□□□ -1.47
GFRA3O60609 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.87□□□□□ -1.47
GFRA3O60609 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
GFRA3O60609 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
GFRA3O60609 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA3O60609 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
GFRA3O60609 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA3O60609 AC005839.1-201ENST00000624148 3213 ntBASIC5.87□□□□□ -1.47
GFRA3O60609 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA3O60609 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA3O60609 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA3O60609 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
GFRA3O60609 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA3O60609 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.87□□□□□ -1.47
GFRA3O60609 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 MAK-202ENST00000354489 3941 ntTSL 5 BASIC5.86□□□□□ -1.47
GFRA3O60609 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC5.86□□□□□ -1.47
GFRA3O60609 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
GFRA3O60609 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 AC068870.1-201ENST00000563737 2455 ntBASIC5.86□□□□□ -1.47
GFRA3O60609 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.86□□□□□ -1.47
GFRA3O60609 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GFRA3O60609 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms