Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.56□□□□□ -1.84
SSX4O60224 AC127502.3-201ENST00000636170 1206 ntBASIC3.56□□□□□ -1.84
SSX4O60224 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX4O60224 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SSX4O60224 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
SSX4O60224 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSX4O60224 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSX4O60224 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SSX4O60224 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX4O60224 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSX4O60224 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSX4O60224 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSX4O60224 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SSX4O60224 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSX4O60224 AC092447.10-201ENST00000620607 1652 ntBASIC3.55□□□□□ -1.84
SSX4O60224 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSX4O60224 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SSX4O60224 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX4O60224 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX4O60224 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
SSX4O60224 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSX4O60224 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX4O60224 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SSX4O60224 SNORD6-201ENST00000365444 73 ntBASIC3.55□□□□□ -1.84
SSX4O60224 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSX4O60224 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX4O60224 MIR23A-201ENST00000385245 73 ntBASIC3.55□□□□□ -1.84
SSX4O60224 RPS3AP26-201ENST00000398259 784 ntBASIC3.55□□□□□ -1.84
SSX4O60224 TPMTP3-201ENST00000411928 735 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AC090960.1-201ENST00000421072 306 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX4O60224 BX119904.4-201ENST00000424402 301 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AC002075.2-201ENST00000425207 252 ntBASIC3.55□□□□□ -1.84
SSX4O60224 OR8F1P-201ENST00000425243 930 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AL445669.1-201ENST00000426743 755 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AC017083.1-201ENST00000428093 483 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX4O60224 LARP1BP3-201ENST00000437229 869 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AL138799.3-201ENST00000438968 350 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX4O60224 AL500522.2-201ENST00000448562 343 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX4O60224 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX4O60224 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX4O60224 AC034236.1-201ENST00000469891 373 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AC010285.1-201ENST00000470580 392 ntBASIC3.55□□□□□ -1.84
SSX4O60224 SETP11-201ENST00000473027 690 ntBASIC3.55□□□□□ -1.84
SSX4O60224 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSX4O60224 RN7SL604P-201ENST00000492589 296 ntBASIC3.55□□□□□ -1.84
SSX4O60224 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SSX4O60224 AC005921.1-201ENST00000510589 286 ntBASIC3.55□□□□□ -1.84
SSX4O60224 Y_RNA.688-201ENST00000516565 95 ntBASIC3.55□□□□□ -1.84
SSX4O60224 SNORA67.7-201ENST00000516664 135 ntBASIC3.55□□□□□ -1.84
SSX4O60224 RNU6-1231P-201ENST00000517185 103 ntBASIC3.55□□□□□ -1.84
SSX4O60224 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX4O60224 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX4O60224 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX4O60224 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX4O60224 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX4O60224 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX4O60224 GTF2IP22-201ENST00000554443 182 ntBASIC3.55□□□□□ -1.84
SSX4O60224 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX4O60224 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX4O60224 MIR3158-1-201ENST00000583596 81 ntBASIC3.55□□□□□ -1.84
SSX4O60224 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX4O60224 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX4O60224 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX4O60224 AC007687.1-201ENST00000602704 304 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AC104662.1-201ENST00000604448 511 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AL031176.1-201ENST00000604554 466 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AL590099.1-201ENST00000615276 138 ntBASIC3.55□□□□□ -1.84
SSX4O60224 MIR7844-201ENST00000616161 122 ntBASIC3.55□□□□□ -1.84
SSX4O60224 AC006927.3-201ENST00000638789 384 ntBASIC3.55□□□□□ -1.84
SSX4O60224 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX4O60224 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX4O60224 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX4O60224 AL365440.1-201ENST00000436135 2167 ntBASIC3.55□□□□□ -1.84
SSX4O60224 IPO8P1-201ENST00000455509 3109 ntBASIC3.55□□□□□ -1.84
SSX4O60224 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SSX4O60224 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX4O60224 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSX4O60224 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.54□□□□□ -1.84
SSX4O60224 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSX4O60224 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSX4O60224 UBE3AP2-201ENST00000429033 2259 ntBASIC3.54□□□□□ -1.84
SSX4O60224 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.54□□□□□ -1.84
SSX4O60224 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.54□□□□□ -1.84
SSX4O60224 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSX4O60224 SNORA7.2-201ENST00000364446 145 ntBASIC3.54□□□□□ -1.84
SSX4O60224 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SSX4O60224 MIR1305-201ENST00000408300 86 ntBASIC3.54□□□□□ -1.84
SSX4O60224 RN7SKP159-201ENST00000410657 292 ntBASIC3.54□□□□□ -1.84
SSX4O60224 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.54□□□□□ -1.84
SSX4O60224 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX4O60224 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX4O60224 MTCO3P12-201ENST00000416718 547 ntBASIC3.54□□□□□ -1.84
SSX4O60224 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.54□□□□□ -1.84
SSX4O60224 AL159169.1-201ENST00000421119 127 ntBASIC3.54□□□□□ -1.84
SSX4O60224 AL451062.2-201ENST00000427515 271 ntBASIC3.54□□□□□ -1.84
SSX4O60224 AL512649.1-201ENST00000428997 581 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms